Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNAI2O43623 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNAI2O43623 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNAI2O43623 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.28■□□□□ 0.2
SNAI2O43623 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNAI2O43623 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SNAI2O43623 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNAI2O43623 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.28■□□□□ 0.2
SNAI2O43623 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNAI2O43623 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.28■□□□□ 0.2
SNAI2O43623 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNAI2O43623 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNAI2O43623 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.28■□□□□ 0.2
SNAI2O43623 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SNAI2O43623 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
SNAI2O43623 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SNAI2O43623 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNAI2O43623 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNAI2O43623 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNAI2O43623 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNAI2O43623 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNAI2O43623 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SNAI2O43623 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.27■□□□□ 0.2
SNAI2O43623 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.27■□□□□ 0.2
SNAI2O43623 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SNAI2O43623 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SNAI2O43623 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SNAI2O43623 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SNAI2O43623 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.27■□□□□ 0.19
SNAI2O43623 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.27■□□□□ 0.19
SNAI2O43623 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNAI2O43623 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNAI2O43623 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNAI2O43623 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.26■□□□□ 0.19
SNAI2O43623 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNAI2O43623 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.26■□□□□ 0.19
SNAI2O43623 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.26■□□□□ 0.19
SNAI2O43623 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.26■□□□□ 0.19
SNAI2O43623 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SNAI2O43623 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.26■□□□□ 0.19
SNAI2O43623 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.26■□□□□ 0.19
SNAI2O43623 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.26■□□□□ 0.19
SNAI2O43623 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNAI2O43623 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNAI2O43623 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNAI2O43623 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SNAI2O43623 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNAI2O43623 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNAI2O43623 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNAI2O43623 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNAI2O43623 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.26■□□□□ 0.19
SNAI2O43623 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNAI2O43623 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNAI2O43623 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNAI2O43623 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNAI2O43623 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNAI2O43623 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNAI2O43623 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNAI2O43623 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNAI2O43623 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNAI2O43623 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNAI2O43623 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNAI2O43623 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNAI2O43623 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.25■□□□□ 0.19
SNAI2O43623 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.25■□□□□ 0.19
SNAI2O43623 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SNAI2O43623 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SNAI2O43623 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SNAI2O43623 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.25■□□□□ 0.19
SNAI2O43623 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SNAI2O43623 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.25■□□□□ 0.19
SNAI2O43623 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SNAI2O43623 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.25■□□□□ 0.19
SNAI2O43623 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SNAI2O43623 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SNAI2O43623 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SNAI2O43623 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SNAI2O43623 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.24■□□□□ 0.19
SNAI2O43623 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SNAI2O43623 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNAI2O43623 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SNAI2O43623 AC080038.3-201ENST00000623346 1952 ntBASIC16.24■□□□□ 0.19
SNAI2O43623 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNAI2O43623 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNAI2O43623 AC004448.1-201ENST00000458332 883 ntBASIC16.24■□□□□ 0.19
SNAI2O43623 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.24■□□□□ 0.19
SNAI2O43623 AC129492.7-201ENST00000622992 756 ntBASIC16.24■□□□□ 0.19
SNAI2O43623 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNAI2O43623 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SNAI2O43623 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNAI2O43623 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNAI2O43623 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SNAI2O43623 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNAI2O43623 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNAI2O43623 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SNAI2O43623 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SNAI2O43623 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNAI2O43623 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SNAI2O43623 AF131216.4-201ENST00000638924 1588 ntBASIC16.23■□□□□ 0.19
SNAI2O43623 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms