Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC31.38■■■□□ 2.61
VGFO15240 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
VGFO15240 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
VGFO15240 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
VGFO15240 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.37■■■□□ 2.61
VGFO15240 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC31.37■■■□□ 2.61
VGFO15240 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
VGFO15240 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
VGFO15240 H19-210ENST00000439725 1929 ntTSL 2 BASIC31.36■■■□□ 2.61
VGFO15240 USP45-205ENST00000472914 1617 ntTSL 5 BASIC31.36■■■□□ 2.61
VGFO15240 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
VGFO15240 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC31.36■■■□□ 2.61
VGFO15240 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
VGFO15240 GXYLT1P5-201ENST00000614548 1189 ntBASIC31.36■■■□□ 2.61
VGFO15240 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
VGFO15240 AL139125.2-201ENST00000623134 1869 ntBASIC31.35■■■□□ 2.61
VGFO15240 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
VGFO15240 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC31.35■■■□□ 2.61
VGFO15240 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
VGFO15240 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
VGFO15240 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
VGFO15240 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC31.34■■■□□ 2.61
VGFO15240 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
VGFO15240 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC31.34■■■□□ 2.61
VGFO15240 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
VGFO15240 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC31.33■■■□□ 2.61
VGFO15240 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
VGFO15240 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
VGFO15240 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC31.33■■■□□ 2.61
VGFO15240 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
VGFO15240 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.33■■■□□ 2.61
VGFO15240 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC31.33■■■□□ 2.61
VGFO15240 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
VGFO15240 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
VGFO15240 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC31.32■■■□□ 2.6
VGFO15240 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
VGFO15240 PPP1R14BP3-201ENST00000509033 445 ntBASIC31.32■■■□□ 2.6
VGFO15240 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC31.32■■■□□ 2.6
VGFO15240 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC31.32■■■□□ 2.6
VGFO15240 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
VGFO15240 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
VGFO15240 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC31.31■■■□□ 2.6
VGFO15240 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
VGFO15240 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC31.31■■■□□ 2.6
VGFO15240 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
VGFO15240 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
VGFO15240 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC31.31■■■□□ 2.6
VGFO15240 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
VGFO15240 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC31.31■■■□□ 2.6
VGFO15240 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
VGFO15240 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
VGFO15240 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
VGFO15240 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
VGFO15240 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC31.3■■■□□ 2.6
VGFO15240 METTL26-203ENST00000397664 604 ntTSL 2 BASIC31.3■■■□□ 2.6
VGFO15240 KRT18P11-201ENST00000435214 1283 ntBASIC31.3■■■□□ 2.6
VGFO15240 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC31.3■■■□□ 2.6
VGFO15240 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
VGFO15240 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
VGFO15240 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
VGFO15240 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
VGFO15240 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
VGFO15240 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
VGFO15240 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
VGFO15240 MAP2K4P1-201ENST00000438453 1195 ntBASIC31.29■■■□□ 2.6
VGFO15240 AC079140.4-201ENST00000507448 529 ntBASIC31.29■■■□□ 2.6
VGFO15240 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
VGFO15240 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
VGFO15240 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
VGFO15240 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC31.28■■■□□ 2.6
VGFO15240 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
VGFO15240 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
VGFO15240 ASL-203ENST00000380839 1765 ntTSL 5 BASIC31.28■■■□□ 2.6
VGFO15240 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC31.28■■■□□ 2.6
VGFO15240 CROCCP5-201ENST00000436658 830 ntBASIC31.28■■■□□ 2.6
VGFO15240 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC31.28■■■□□ 2.6
VGFO15240 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
VGFO15240 EMC9-206ENST00000560403 872 ntTSL 2 BASIC31.28■■■□□ 2.6
VGFO15240 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
VGFO15240 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
VGFO15240 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
VGFO15240 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC31.27■■■□□ 2.6
VGFO15240 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
VGFO15240 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
VGFO15240 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
VGFO15240 ESRRAP2-201ENST00000418437 1549 ntBASIC31.26■■■□□ 2.59
VGFO15240 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC31.26■■■□□ 2.59
VGFO15240 AC104771.1-201ENST00000603335 964 ntBASIC31.26■■■□□ 2.59
VGFO15240 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
VGFO15240 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
VGFO15240 ABCB10P4-201ENST00000566803 2184 ntBASIC31.25■■■□□ 2.59
VGFO15240 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
VGFO15240 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
VGFO15240 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC31.25■■■□□ 2.59
VGFO15240 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC31.25■■■□□ 2.59
VGFO15240 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC31.25■■■□□ 2.59
VGFO15240 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC31.25■■■□□ 2.59
VGFO15240 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC31.25■■■□□ 2.59
VGFO15240 AC011767.1-201ENST00000617410 1153 ntBASIC31.25■■■□□ 2.59
VGFO15240 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms