Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 AC005082.1-201ENST00000413042 2259 ntBASIC17.3■□□□□ 0.36
PCP4L1A6NKN8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
PCP4L1A6NKN8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC17.28■□□□□ 0.36
PCP4L1A6NKN8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCP4L1A6NKN8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.28■□□□□ 0.36
PCP4L1A6NKN8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCP4L1A6NKN8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCP4L1A6NKN8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCP4L1A6NKN8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCP4L1A6NKN8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCP4L1A6NKN8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCP4L1A6NKN8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCP4L1A6NKN8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCP4L1A6NKN8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.27■□□□□ 0.36
PCP4L1A6NKN8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCP4L1A6NKN8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCP4L1A6NKN8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PCP4L1A6NKN8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.27■□□□□ 0.36
PCP4L1A6NKN8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCP4L1A6NKN8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.27■□□□□ 0.36
PCP4L1A6NKN8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCP4L1A6NKN8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PCP4L1A6NKN8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCP4L1A6NKN8 AC005332.8-201ENST00000622750 2735 ntBASIC17.27■□□□□ 0.36
PCP4L1A6NKN8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCP4L1A6NKN8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCP4L1A6NKN8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
PCP4L1A6NKN8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.27■□□□□ 0.35
PCP4L1A6NKN8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PCP4L1A6NKN8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCP4L1A6NKN8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCP4L1A6NKN8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCP4L1A6NKN8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
PCP4L1A6NKN8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.27■□□□□ 0.35
PCP4L1A6NKN8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCP4L1A6NKN8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCP4L1A6NKN8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCP4L1A6NKN8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCP4L1A6NKN8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCP4L1A6NKN8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCP4L1A6NKN8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCP4L1A6NKN8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCP4L1A6NKN8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.26■□□□□ 0.35
PCP4L1A6NKN8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.26■□□□□ 0.35
PCP4L1A6NKN8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 BCL2-203ENST00000589955 5011 ntBASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCP4L1A6NKN8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
PCP4L1A6NKN8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms