Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 ANOS2P-203ENST00000472227 1816 ntBASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 AC009086.3-201ENST00000623486 1008 ntBASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV26-1A0A087WT03 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.71■□□□□ 0.1
TRAV26-1A0A087WT03 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV26-1A0A087WT03 AC092068.2-201ENST00000590491 1708 ntBASIC15.71■□□□□ 0.1
TRAV26-1A0A087WT03 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
TRAV26-1A0A087WT03 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV26-1A0A087WT03 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV26-1A0A087WT03 LINC01529-204ENST00000636474 1715 ntBASIC15.69■□□□□ 0.1
TRAV26-1A0A087WT03 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV26-1A0A087WT03 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV26-1A0A087WT03 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.69■□□□□ 0.1
TRAV26-1A0A087WT03 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV26-1A0A087WT03 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV26-1A0A087WT03 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV26-1A0A087WT03 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV26-1A0A087WT03 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV26-1A0A087WT03 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV26-1A0A087WT03 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV26-1A0A087WT03 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV26-1A0A087WT03 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 SYT6-210ENST00000641643 1587 ntBASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 FP325331.1-202ENST00000623531 1380 ntBASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 DUX4L19-201ENST00000557448 1267 ntBASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV26-1A0A087WT03 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 AL353803.4-201ENST00000565882 1934 ntBASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 AC096631.2-201ENST00000436136 790 ntBASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms