Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 AC007952.6-201ENST00000573168 2673 ntBASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 AC003957.1-201ENST00000625108 2673 ntBASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV6A0A075B6T7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 KRT18P10-201ENST00000388836 1287 ntBASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV6A0A075B6T7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV6A0A075B6T7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAV6A0A075B6T7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAV6A0A075B6T7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV6A0A075B6T7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.72■□□□□ 0.59
TRAV6A0A075B6T7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAV6A0A075B6T7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRAV6A0A075B6T7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV6A0A075B6T7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV6A0A075B6T7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAV6A0A075B6T7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV6A0A075B6T7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV6A0A075B6T7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV6A0A075B6T7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV6A0A075B6T7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRAV6A0A075B6T7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV6A0A075B6T7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRAV6A0A075B6T7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TRAV6A0A075B6T7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV6A0A075B6T7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TRAV6A0A075B6T7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV6A0A075B6T7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV6A0A075B6T7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRAV6A0A075B6T7 AL353803.4-201ENST00000565882 1934 ntBASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV6A0A075B6T7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV6A0A075B6T7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV6A0A075B6T7 AF106564.1-201ENST00000607058 2553 ntBASIC18.69■□□□□ 0.58
TRAV6A0A075B6T7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV6A0A075B6T7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAV6A0A075B6T7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV6A0A075B6T7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV6A0A075B6T7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV6A0A075B6T7 AC244015.2-201ENST00000616358 1861 ntBASIC18.69■□□□□ 0.58
TRAV6A0A075B6T7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV6A0A075B6T7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV6A0A075B6T7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV6A0A075B6T7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV6A0A075B6T7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV6A0A075B6T7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV6A0A075B6T7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV6A0A075B6T7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV6A0A075B6T7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV6A0A075B6T7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV6A0A075B6T7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRAV6A0A075B6T7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRAV6A0A075B6T7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRAV6A0A075B6T7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRAV6A0A075B6T7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV6A0A075B6T7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV6A0A075B6T7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV6A0A075B6T7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV6A0A075B6T7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms