Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 RPL35P9-201ENST00000446059 350 ntBASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 GNG10P1-201ENST00000452289 199 ntBASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 PFN2-212ENST00000490975 858 ntTSL 4 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 HNRNPA1P7-201ENST00000521273 963 ntBASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 AL359219.1-201ENST00000556311 934 ntBASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 AC018645.3-201ENST00000628855 2646 ntBASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 LINC01561-201ENST00000369071 2176 ntBASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
POLR2J2Q9GZM3 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AP002008.2-201ENST00000635926 4870 ntBASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AC010182.1-201ENST00000548943 2434 ntBASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AC092506.1-202ENST00000401022 528 ntBASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 HLA-DQB2-229ENST00000411527 1059 ntBASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AC099344.2-201ENST00000430897 1061 ntTSL 2 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 HNRNPA1P8-201ENST00000436090 951 ntBASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 RPL35P1-201ENST00000450819 370 ntBASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 UPF3AP2-201ENST00000457924 1132 ntBASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 TMCO5B-205ENST00000530020 894 ntBASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 FOXN3-AS2-201ENST00000554071 1262 ntBASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AC020897.1-201ENST00000587702 561 ntTSL 4 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 DBP-202ENST00000593500 712 ntTSL 2 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AC010326.4-202ENST00000603829 541 ntBASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AC010326.4-201ENST00000604665 891 ntBASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 PKM-222ENST00000568883 1863 ntTSL 5 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 AC134682.1-201ENST00000569285 3377 ntBASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
POLR2J2Q9GZM3 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms