Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC13.5□□□□□ -0.25
MTHFRP42898 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 AC092100.1-201ENST00000435148 702 ntTSL 3 BASIC13.5□□□□□ -0.25
MTHFRP42898 RPS15P5-201ENST00000449885 432 ntBASIC13.5□□□□□ -0.25
MTHFRP42898 RN7SL340P-201ENST00000470792 296 ntBASIC13.5□□□□□ -0.25
MTHFRP42898 RN7SL105P-201ENST00000475661 299 ntBASIC13.5□□□□□ -0.25
MTHFRP42898 SLIRP-209ENST00000557342 408 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC13.5□□□□□ -0.25
MTHFRP42898 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC13.5□□□□□ -0.25
MTHFRP42898 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC13.5□□□□□ -0.25
MTHFRP42898 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
MTHFRP42898 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 LINC00567-201ENST00000569854 3409 ntBASIC13.5□□□□□ -0.25
MTHFRP42898 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
MTHFRP42898 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.5□□□□□ -0.25
MTHFRP42898 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
MTHFRP42898 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC13.5□□□□□ -0.25
MTHFRP42898 AC009093.9-201ENST00000566038 1611 ntBASIC13.5□□□□□ -0.25
MTHFRP42898 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
MTHFRP42898 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
MTHFRP42898 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
MTHFRP42898 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.49□□□□□ -0.25
MTHFRP42898 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.49□□□□□ -0.25
MTHFRP42898 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
MTHFRP42898 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
MTHFRP42898 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 P2RX6P-202ENST00000450626 357 ntBASIC13.49□□□□□ -0.25
MTHFRP42898 AC023157.1-201ENST00000453713 402 ntBASIC13.49□□□□□ -0.25
MTHFRP42898 DEGS2-202ENST00000553834 421 ntTSL 3 BASIC13.49□□□□□ -0.25
MTHFRP42898 AL160313.2-201ENST00000555875 493 ntTSL 3 BASIC13.49□□□□□ -0.25
MTHFRP42898 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 AC133539.1-201ENST00000562644 420 ntTSL 5 BASIC13.49□□□□□ -0.25
MTHFRP42898 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC13.49□□□□□ -0.25
MTHFRP42898 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC13.49□□□□□ -0.25
MTHFRP42898 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC13.49□□□□□ -0.25
MTHFRP42898 AL160287.1-203ENST00000637960 1061 ntBASIC13.49□□□□□ -0.25
MTHFRP42898 PAX6-247ENST00000638965 979 ntTSL 5 BASIC13.49□□□□□ -0.25
MTHFRP42898 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC13.49□□□□□ -0.25
MTHFRP42898 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
MTHFRP42898 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.49□□□□□ -0.25
MTHFRP42898 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
MTHFRP42898 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 PKMP1-201ENST00000455804 1523 ntBASIC13.49□□□□□ -0.25
MTHFRP42898 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MTHFRP42898 STRCP1-201ENST00000509801 5328 ntBASIC13.49□□□□□ -0.25
MTHFRP42898 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MTHFRP42898 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MTHFRP42898 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MTHFRP42898 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MTHFRP42898 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MTHFRP42898 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MTHFRP42898 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
MTHFRP42898 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MTHFRP42898 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.48□□□□□ -0.25
MTHFRP42898 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.48□□□□□ -0.25
MTHFRP42898 AL022323.5-201ENST00000624101 2059 ntBASIC13.48□□□□□ -0.25
MTHFRP42898 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MTHFRP42898 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.48□□□□□ -0.25
MTHFRP42898 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MTHFRP42898 ACAA2-205ENST00000587994 1657 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
MTHFRP42898 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
MTHFRP42898 GNRH2-203ENST00000380346 353 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
MTHFRP42898 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
MTHFRP42898 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC13.48□□□□□ -0.25
MTHFRP42898 LINC00189-201ENST00000420364 989 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MTHFRP42898 MTND6P7-201ENST00000433237 524 ntBASIC13.48□□□□□ -0.25
MTHFRP42898 C2orf27AP2-201ENST00000438438 555 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms