Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
MTHFRP42898 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MTHFRP42898 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
MTHFRP42898 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
MTHFRP42898 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC13.52□□□□□ -0.25
MTHFRP42898 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MTHFRP42898 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
MTHFRP42898 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC13.52□□□□□ -0.25
MTHFRP42898 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC13.52□□□□□ -0.25
MTHFRP42898 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MTHFRP42898 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MTHFRP42898 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MTHFRP42898 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MTHFRP42898 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
MTHFRP42898 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.52□□□□□ -0.25
MTHFRP42898 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MTHFRP42898 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.52□□□□□ -0.25
MTHFRP42898 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MTHFRP42898 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.52□□□□□ -0.25
MTHFRP42898 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
MTHFRP42898 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
MTHFRP42898 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MTHFRP42898 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MTHFRP42898 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.52□□□□□ -0.25
MTHFRP42898 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MTHFRP42898 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.51□□□□□ -0.25
MTHFRP42898 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.51□□□□□ -0.25
MTHFRP42898 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 EGLN3-205ENST00000547327 2849 ntBASIC13.51□□□□□ -0.25
MTHFRP42898 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
MTHFRP42898 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.51□□□□□ -0.25
MTHFRP42898 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MTHFRP42898 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.51□□□□□ -0.25
MTHFRP42898 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.51□□□□□ -0.25
MTHFRP42898 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.51□□□□□ -0.25
MTHFRP42898 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC13.51□□□□□ -0.25
MTHFRP42898 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MTHFRP42898 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC13.51□□□□□ -0.25
MTHFRP42898 MRPS16P3-201ENST00000415961 374 ntBASIC13.51□□□□□ -0.25
MTHFRP42898 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC13.51□□□□□ -0.25
MTHFRP42898 CTSLP1-201ENST00000457530 1002 ntBASIC13.51□□□□□ -0.25
MTHFRP42898 AC092944.1-204ENST00000475102 384 ntTSL 5 BASIC13.51□□□□□ -0.25
MTHFRP42898 EEF1GP2-201ENST00000509352 1243 ntBASIC13.51□□□□□ -0.25
MTHFRP42898 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
MTHFRP42898 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 RN7SL750P-201ENST00000582814 238 ntBASIC13.51□□□□□ -0.25
MTHFRP42898 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
MTHFRP42898 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC13.51□□□□□ -0.25
MTHFRP42898 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC13.51□□□□□ -0.25
MTHFRP42898 AC007274.3-201ENST00000619838 385 ntBASIC13.51□□□□□ -0.25
MTHFRP42898 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.51□□□□□ -0.25
MTHFRP42898 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.51□□□□□ -0.25
MTHFRP42898 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
MTHFRP42898 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.51□□□□□ -0.25
MTHFRP42898 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.51□□□□□ -0.25
MTHFRP42898 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.51□□□□□ -0.25
MTHFRP42898 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MTHFRP42898 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.5□□□□□ -0.25
MTHFRP42898 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
MTHFRP42898 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
MTHFRP42898 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.5□□□□□ -0.25
MTHFRP42898 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
MTHFRP42898 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
MTHFRP42898 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
MTHFRP42898 AL355102.3-201ENST00000554299 1678 ntBASIC13.5□□□□□ -0.25
MTHFRP42898 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
MTHFRP42898 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 AL356583.1-201ENST00000398739 1371 ntBASIC13.5□□□□□ -0.25
MTHFRP42898 AC005154.3-201ENST00000419639 1393 ntBASIC13.5□□□□□ -0.25
MTHFRP42898 AL445250.1-201ENST00000641671 2259 ntBASIC13.5□□□□□ -0.25
MTHFRP42898 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
MTHFRP42898 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.5□□□□□ -0.25
MTHFRP42898 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
MTHFRP42898 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
MTHFRP42898 MGST3-204ENST00000367888 778 ntTSL 3 BASIC13.5□□□□□ -0.25
MTHFRP42898 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MTHFRP42898 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
MTHFRP42898 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
MTHFRP42898 MBL3P-201ENST00000402234 644 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms