Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 AC010969.2-201ENST00000602458 3231 ntBASIC12.83□□□□□ -0.36
SATB2Q9UPW6 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 HLF-202ENST00000430986 1385 ntTSL 2 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 SERF2-204ENST00000402131 586 ntTSL 2 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 SNORA50D-201ENST00000408059 134 ntBASIC12.82□□□□□ -0.36
SATB2Q9UPW6 AC006328.1-201ENST00000437571 379 ntBASIC12.82□□□□□ -0.36
SATB2Q9UPW6 B9D1-206ENST00000461069 923 ntTSL 2 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 RNA5SP288-201ENST00000516075 93 ntBASIC12.82□□□□□ -0.36
SATB2Q9UPW6 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 RN7SL478P-201ENST00000584358 298 ntBASIC12.82□□□□□ -0.36
SATB2Q9UPW6 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 CLPP-205ENST00000596605 646 ntTSL 2 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 AC136475.7-201ENST00000602949 592 ntBASIC12.82□□□□□ -0.36
SATB2Q9UPW6 SNX20-205ENST00000610485 557 ntTSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 MDC1-209ENST00000613547 830 ntTSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 AC244097.1-201ENST00000621631 1216 ntBASIC12.82□□□□□ -0.36
SATB2Q9UPW6 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 AC026271.4-201ENST00000578214 1833 ntBASIC12.82□□□□□ -0.36
SATB2Q9UPW6 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 AC015819.3-201ENST00000624305 2674 ntBASIC12.82□□□□□ -0.36
SATB2Q9UPW6 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
SATB2Q9UPW6 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SATB2Q9UPW6 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms