Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 LINC00511-202ENST00000457958 1696 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 OR10N1P-203ENST00000641736 1305 ntBASIC10.56□□□□□ -0.72
RAB40CQ96S21 SEPT3-202ENST00000396425 4649 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 PMEL-204ENST00000548493 2204 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AL132656.4-201ENST00000623504 2122 ntBASIC10.55□□□□□ -0.72
RAB40CQ96S21 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AL118508.3-201ENST00000623468 1854 ntBASIC10.55□□□□□ -0.72
RAB40CQ96S21 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AC020907.1-201ENST00000616460 1350 ntBASIC10.55□□□□□ -0.72
RAB40CQ96S21 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 GRAMD1B-203ENST00000456860 2805 ntTSL 2 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 MEI1-201ENST00000401548 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 POLR3H-203ENST00000396504 4176 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AL121772.1-201ENST00000618303 2335 ntTSL 2 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 STX16-205ENST00000361830 4318 ntTSL 5 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 PRR13-202ENST00000429243 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 STK24P1-201ENST00000455035 1291 ntBASIC10.55□□□□□ -0.72
RAB40CQ96S21 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 NDUFV2P1-201ENST00000596415 907 ntBASIC10.55□□□□□ -0.72
RAB40CQ96S21 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 CTAGE5-202ENST00000280083 3860 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 PHB-214ENST00000614445 1952 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AC244154.1-201ENST00000620148 1555 ntBASIC10.55□□□□□ -0.72
RAB40CQ96S21 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 BEST3-201ENST00000266661 1876 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 NDUFAF7-202ENST00000336237 1869 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 LONP2-203ENST00000535754 2580 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 NEK6-213ENST00000540326 2578 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
RAB40CQ96S21 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 PRDM7-202ENST00000449207 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms