Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC022497.1-201ENST00000624916 3691 ntBASIC13.85□□□□□ -0.19
O00370 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC13.85□□□□□ -0.19
O00370 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
O00370 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
O00370 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 PTPRVP-205ENST00000641549 5067 ntBASIC13.85□□□□□ -0.19
O00370 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.85□□□□□ -0.19
O00370 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
O00370 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
O00370 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC13.85□□□□□ -0.19
O00370 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC13.85□□□□□ -0.19
O00370 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
O00370 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC13.84□□□□□ -0.19
O00370 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
O00370 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 CREB5-204ENST00000396300 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC13.84□□□□□ -0.19
O00370 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 C16orf78-201ENST00000299191 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
O00370 MIR632-201ENST00000385193 94 ntBASIC13.84□□□□□ -0.19
O00370 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC13.84□□□□□ -0.19
O00370 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 AL356000.1-201ENST00000441073 1238 ntBASIC13.84□□□□□ -0.19
O00370 AL451000.1-201ENST00000451300 1186 ntBASIC13.84□□□□□ -0.19
O00370 RN7SL789P-201ENST00000478944 293 ntBASIC13.84□□□□□ -0.19
O00370 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC13.84□□□□□ -0.19
O00370 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC13.84□□□□□ -0.19
O00370 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 AC012158.2-201ENST00000536546 354 ntBASIC13.84□□□□□ -0.19
O00370 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC13.84□□□□□ -0.19
O00370 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC13.84□□□□□ -0.19
O00370 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
O00370 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.84□□□□□ -0.19
O00370 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.84□□□□□ -0.19
O00370 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC13.84□□□□□ -0.19
O00370 AC138466.4-201ENST00000623965 852 ntBASIC13.84□□□□□ -0.19
O00370 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC13.84□□□□□ -0.19
O00370 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
O00370 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC13.84□□□□□ -0.19
O00370 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
O00370 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
O00370 AC067852.6-201ENST00000591237 1736 ntBASIC13.84□□□□□ -0.19
O00370 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
O00370 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
O00370 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.84□□□□□ -0.19
O00370 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC13.83□□□□□ -0.19
O00370 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC13.83□□□□□ -0.19
O00370 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.19
O00370 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
O00370 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
O00370 AC133919.3-201ENST00000621407 1804 ntBASIC13.83□□□□□ -0.2
O00370 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC13.83□□□□□ -0.2
O00370 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
O00370 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 AC009549.1-201ENST00000603468 1686 ntBASIC13.83□□□□□ -0.2
O00370 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
O00370 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 CYP2B7P-201ENST00000541697 1476 ntBASIC13.83□□□□□ -0.2
O00370 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC13.83□□□□□ -0.2
O00370 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC13.83□□□□□ -0.2
O00370 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
O00370 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
O00370 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms