Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04436 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04436 AIFM1P1-201ENST00000413342 1841 ntBASIC11.9□□□□□ -0.5
P04436 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04436 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04436 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
P04436 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC11.9□□□□□ -0.5
P04436 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC11.9□□□□□ -0.5
P04436 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC11.9□□□□□ -0.5
P04436 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.9□□□□□ -0.5
P04436 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC11.9□□□□□ -0.5
P04436 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04436 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04436 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC11.9□□□□□ -0.5
P04436 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04436 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04436 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
P04436 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
P04436 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
P04436 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
P04436 SUPT20HL1-201ENST00000436466 2618 ntBASIC11.9□□□□□ -0.51
P04436 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
P04436 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.89□□□□□ -0.51
P04436 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC11.89□□□□□ -0.51
P04436 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
P04436 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.89□□□□□ -0.51
P04436 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC11.89□□□□□ -0.51
P04436 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.89□□□□□ -0.51
P04436 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.89□□□□□ -0.51
P04436 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.89□□□□□ -0.51
P04436 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
P04436 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
P04436 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC11.89□□□□□ -0.51
P04436 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.89□□□□□ -0.51
P04436 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
P04436 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC11.89□□□□□ -0.51
P04436 SLC25A6P1-201ENST00000412123 775 ntBASIC11.89□□□□□ -0.51
P04436 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC11.89□□□□□ -0.51
P04436 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC11.89□□□□□ -0.51
P04436 DPY19L2P4-201ENST00000479881 442 ntBASIC11.89□□□□□ -0.51
P04436 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC11.89□□□□□ -0.51
P04436 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC11.89□□□□□ -0.51
P04436 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC11.89□□□□□ -0.51
P04436 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC11.89□□□□□ -0.51
P04436 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC11.89□□□□□ -0.51
P04436 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC11.89□□□□□ -0.51
P04436 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC11.89□□□□□ -0.51
P04436 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC11.89□□□□□ -0.51
P04436 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC11.89□□□□□ -0.51
P04436 AL353622.2-201ENST00000605846 425 ntBASIC11.89□□□□□ -0.51
P04436 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC11.89□□□□□ -0.51
P04436 AC108673.2-201ENST00000608909 565 ntBASIC11.89□□□□□ -0.51
P04436 SNX20-205ENST00000610485 557 ntTSL 5 BASIC11.89□□□□□ -0.51
P04436 AL627230.2-201ENST00000613254 655 ntBASIC11.89□□□□□ -0.51
P04436 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.89□□□□□ -0.51
P04436 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
P04436 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.89□□□□□ -0.51
P04436 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.89□□□□□ -0.51
P04436 HSPA8P9-201ENST00000485881 1943 ntBASIC11.89□□□□□ -0.51
P04436 JAML-211ENST00000533261 1508 ntTSL 5 BASIC11.89□□□□□ -0.51
P04436 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC11.89□□□□□ -0.51
P04436 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P04436 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
P04436 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
P04436 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.89□□□□□ -0.51
P04436 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04436 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 NELL2-203ENST00000429094 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
P04436 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC11.88□□□□□ -0.51
P04436 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
P04436 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms