Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 AL512631.2-201ENST00000604634 923 ntBASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 EP400NL-214ENST00000641289 2402 ntBASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRB4X5D2U9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.46■□□□□ 0.22
HLA-DRB4X5D2U9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
HLA-DRB4X5D2U9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DRB4X5D2U9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DRB4X5D2U9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 AC092171.4-201ENST00000609130 632 ntBASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DRB4X5D2U9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HLA-DRB4X5D2U9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DRB4X5D2U9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DRB4X5D2U9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DRB4X5D2U9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
HLA-DRB4X5D2U9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DRB4X5D2U9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DRB4X5D2U9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DRB4X5D2U9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
HLA-DRB4X5D2U9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DRB4X5D2U9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-DRB4X5D2U9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DRB4X5D2U9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 AC131281.2-201ENST00000520478 145 ntBASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DRB4X5D2U9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms