Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.68■□□□□ 0.9
GPC6Q9Y625 UNC93B8-201ENST00000511903 705 ntBASIC20.68■□□□□ 0.9
GPC6Q9Y625 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.68■□□□□ 0.9
GPC6Q9Y625 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC6Q9Y625 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
GPC6Q9Y625 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC6Q9Y625 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC6Q9Y625 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
GPC6Q9Y625 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.67■□□□□ 0.9
GPC6Q9Y625 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GPC6Q9Y625 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.67■□□□□ 0.9
GPC6Q9Y625 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.67■□□□□ 0.9
GPC6Q9Y625 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.67■□□□□ 0.9
GPC6Q9Y625 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
GPC6Q9Y625 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC6Q9Y625 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GPC6Q9Y625 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.67■□□□□ 0.9
GPC6Q9Y625 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
GPC6Q9Y625 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC6Q9Y625 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC6Q9Y625 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC6Q9Y625 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.66■□□□□ 0.9
GPC6Q9Y625 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC6Q9Y625 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
GPC6Q9Y625 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.66■□□□□ 0.9
GPC6Q9Y625 AC005703.6-201ENST00000623265 1329 ntBASIC20.66■□□□□ 0.9
GPC6Q9Y625 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.66■□□□□ 0.9
GPC6Q9Y625 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.66■□□□□ 0.9
GPC6Q9Y625 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GPC6Q9Y625 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GPC6Q9Y625 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
GPC6Q9Y625 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GPC6Q9Y625 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.66■□□□□ 0.9
GPC6Q9Y625 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC6Q9Y625 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC6Q9Y625 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GPC6Q9Y625 AC127496.7-201ENST00000625110 1798 ntBASIC20.65■□□□□ 0.9
GPC6Q9Y625 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GPC6Q9Y625 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC6Q9Y625 KRT16P3-201ENST00000439127 1283 ntBASIC20.65■□□□□ 0.9
GPC6Q9Y625 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GPC6Q9Y625 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
GPC6Q9Y625 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GPC6Q9Y625 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC6Q9Y625 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC6Q9Y625 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC6Q9Y625 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC6Q9Y625 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GPC6Q9Y625 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.64■□□□□ 0.9
GPC6Q9Y625 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.64■□□□□ 0.89
GPC6Q9Y625 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC6Q9Y625 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.64■□□□□ 0.89
GPC6Q9Y625 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
GPC6Q9Y625 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.64■□□□□ 0.89
GPC6Q9Y625 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GPC6Q9Y625 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC6Q9Y625 AC242852.2-201ENST00000615738 1807 ntBASIC20.64■□□□□ 0.89
GPC6Q9Y625 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC6Q9Y625 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC6Q9Y625 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
GPC6Q9Y625 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GPC6Q9Y625 PKD1P6-201ENST00000343738 4769 ntBASIC20.63■□□□□ 0.89
GPC6Q9Y625 AC137767.1-201ENST00000602918 1920 ntBASIC20.63■□□□□ 0.89
GPC6Q9Y625 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
GPC6Q9Y625 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GPC6Q9Y625 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GPC6Q9Y625 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.63■□□□□ 0.89
GPC6Q9Y625 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GPC6Q9Y625 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC6Q9Y625 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC6Q9Y625 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
GPC6Q9Y625 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC6Q9Y625 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC6Q9Y625 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC6Q9Y625 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPC6Q9Y625 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GPC6Q9Y625 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPC6Q9Y625 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPC6Q9Y625 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPC6Q9Y625 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.62■□□□□ 0.89
GPC6Q9Y625 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.62■□□□□ 0.89
GPC6Q9Y625 MIR6724-1-201ENST00000616420 92 ntBASIC20.62■□□□□ 0.89
GPC6Q9Y625 MIR6724-2-201ENST00000616483 92 ntBASIC20.62■□□□□ 0.89
GPC6Q9Y625 MIR6724-4-201ENST00000617390 92 ntBASIC20.62■□□□□ 0.89
GPC6Q9Y625 MIR6724-3-201ENST00000622482 92 ntBASIC20.62■□□□□ 0.89
GPC6Q9Y625 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPC6Q9Y625 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
GPC6Q9Y625 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GPC6Q9Y625 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPC6Q9Y625 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.61■□□□□ 0.89
GPC6Q9Y625 AC007375.3-201ENST00000600936 2314 ntBASIC20.61■□□□□ 0.89
GPC6Q9Y625 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GPC6Q9Y625 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.61■□□□□ 0.89
GPC6Q9Y625 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.61■□□□□ 0.89
GPC6Q9Y625 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GPC6Q9Y625 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GPC6Q9Y625 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GPC6Q9Y625 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GPC6Q9Y625 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.61■□□□□ 0.89
GPC6Q9Y625 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms