Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHB13Q9Y5F0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB13Q9Y5F0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PCDHB13Q9Y5F0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB13Q9Y5F0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB13Q9Y5F0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHB13Q9Y5F0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB13Q9Y5F0 AL136162.1-201ENST00000607711 1078 ntBASIC24.24■■□□□ 1.47
PCDHB13Q9Y5F0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHB13Q9Y5F0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
PCDHB13Q9Y5F0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
PCDHB13Q9Y5F0 ESRRAP2-201ENST00000418437 1549 ntBASIC24.24■■□□□ 1.47
PCDHB13Q9Y5F0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB13Q9Y5F0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHB13Q9Y5F0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDHB13Q9Y5F0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHB13Q9Y5F0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHB13Q9Y5F0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHB13Q9Y5F0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHB13Q9Y5F0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHB13Q9Y5F0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHB13Q9Y5F0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHB13Q9Y5F0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHB13Q9Y5F0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDHB13Q9Y5F0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB13Q9Y5F0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB13Q9Y5F0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHB13Q9Y5F0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHB13Q9Y5F0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
PCDHB13Q9Y5F0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHB13Q9Y5F0 OR2I1P-207ENST00000453522 948 ntBASIC24.22■■□□□ 1.47
PCDHB13Q9Y5F0 AC024257.2-201ENST00000549699 147 ntBASIC24.22■■□□□ 1.47
PCDHB13Q9Y5F0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDHB13Q9Y5F0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB13Q9Y5F0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB13Q9Y5F0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 AC135279.3-201ENST00000610945 1311 ntBASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB13Q9Y5F0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.2■■□□□ 1.46
PCDHB13Q9Y5F0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.2■■□□□ 1.46
PCDHB13Q9Y5F0 LINC01960-201ENST00000563759 1884 ntBASIC24.2■■□□□ 1.46
PCDHB13Q9Y5F0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
PCDHB13Q9Y5F0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDHB13Q9Y5F0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB13Q9Y5F0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB13Q9Y5F0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB13Q9Y5F0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.2■■□□□ 1.46
PCDHB13Q9Y5F0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB13Q9Y5F0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHB13Q9Y5F0 AC233723.2-201ENST00000623798 2106 ntBASIC24.19■■□□□ 1.46
PCDHB13Q9Y5F0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHB13Q9Y5F0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHB13Q9Y5F0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHB13Q9Y5F0 PBX2P1-201ENST00000493219 1291 ntBASIC24.19■■□□□ 1.46
PCDHB13Q9Y5F0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHB13Q9Y5F0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.19■■□□□ 1.46
PCDHB13Q9Y5F0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
PCDHB13Q9Y5F0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
PCDHB13Q9Y5F0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
PCDHB13Q9Y5F0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB13Q9Y5F0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB13Q9Y5F0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.18■■□□□ 1.46
PCDHB13Q9Y5F0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHB13Q9Y5F0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHB13Q9Y5F0 MIR4767-201ENST00000582827 78 ntBASIC24.18■■□□□ 1.46
PCDHB13Q9Y5F0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB13Q9Y5F0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
PCDHB13Q9Y5F0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHB13Q9Y5F0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.18■■□□□ 1.46
PCDHB13Q9Y5F0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB13Q9Y5F0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB13Q9Y5F0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
PCDHB13Q9Y5F0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDHB13Q9Y5F0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB13Q9Y5F0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB13Q9Y5F0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB13Q9Y5F0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
PCDHB13Q9Y5F0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
PCDHB13Q9Y5F0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDHB13Q9Y5F0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDHB13Q9Y5F0 AC106739.1-201ENST00000617035 715 ntBASIC24.17■■□□□ 1.46
PCDHB13Q9Y5F0 AC110285.6-201ENST00000617652 491 ntBASIC24.17■■□□□ 1.46
PCDHB13Q9Y5F0 AC087742.1-201ENST00000575880 1738 ntBASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms