Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 MIR7108-201ENST00000614319 87 ntBASIC19.56■□□□□ 0.72
LSM2Q9Y333 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM2Q9Y333 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LSM2Q9Y333 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSM2Q9Y333 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSM2Q9Y333 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM2Q9Y333 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSM2Q9Y333 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM2Q9Y333 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.55■□□□□ 0.72
LSM2Q9Y333 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LSM2Q9Y333 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM2Q9Y333 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LSM2Q9Y333 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.55■□□□□ 0.72
LSM2Q9Y333 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LSM2Q9Y333 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.55■□□□□ 0.72
LSM2Q9Y333 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM2Q9Y333 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LSM2Q9Y333 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM2Q9Y333 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSM2Q9Y333 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.54■□□□□ 0.72
LSM2Q9Y333 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSM2Q9Y333 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.54■□□□□ 0.72
LSM2Q9Y333 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LSM2Q9Y333 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.54■□□□□ 0.72
LSM2Q9Y333 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LSM2Q9Y333 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.54■□□□□ 0.72
LSM2Q9Y333 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.54■□□□□ 0.72
LSM2Q9Y333 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LSM2Q9Y333 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSM2Q9Y333 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.54■□□□□ 0.72
LSM2Q9Y333 LINC01960-201ENST00000563759 1884 ntBASIC19.54■□□□□ 0.72
LSM2Q9Y333 AL121603.2-201ENST00000557373 2117 ntBASIC19.54■□□□□ 0.72
LSM2Q9Y333 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LSM2Q9Y333 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM2Q9Y333 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM2Q9Y333 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.53■□□□□ 0.72
LSM2Q9Y333 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM2Q9Y333 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM2Q9Y333 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.53■□□□□ 0.72
LSM2Q9Y333 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.53■□□□□ 0.72
LSM2Q9Y333 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LSM2Q9Y333 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LSM2Q9Y333 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM2Q9Y333 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM2Q9Y333 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.52■□□□□ 0.72
LSM2Q9Y333 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM2Q9Y333 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LSM2Q9Y333 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM2Q9Y333 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM2Q9Y333 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.52■□□□□ 0.72
LSM2Q9Y333 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM2Q9Y333 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LSM2Q9Y333 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM2Q9Y333 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.71
LSM2Q9Y333 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LSM2Q9Y333 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LSM2Q9Y333 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LSM2Q9Y333 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LSM2Q9Y333 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM2Q9Y333 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.51■□□□□ 0.71
LSM2Q9Y333 AC022616.5-201ENST00000518796 181 ntBASIC19.51■□□□□ 0.71
LSM2Q9Y333 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM2Q9Y333 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM2Q9Y333 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.51■□□□□ 0.71
LSM2Q9Y333 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.51■□□□□ 0.71
LSM2Q9Y333 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LSM2Q9Y333 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM2Q9Y333 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LSM2Q9Y333 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.51■□□□□ 0.71
LSM2Q9Y333 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM2Q9Y333 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM2Q9Y333 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LSM2Q9Y333 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LSM2Q9Y333 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM2Q9Y333 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LSM2Q9Y333 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM2Q9Y333 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM2Q9Y333 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LSM2Q9Y333 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LSM2Q9Y333 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LSM2Q9Y333 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.5■□□□□ 0.71
LSM2Q9Y333 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LSM2Q9Y333 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.5■□□□□ 0.71
LSM2Q9Y333 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LSM2Q9Y333 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM2Q9Y333 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM2Q9Y333 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LSM2Q9Y333 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.5■□□□□ 0.71
LSM2Q9Y333 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.49■□□□□ 0.71
LSM2Q9Y333 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM2Q9Y333 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM2Q9Y333 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LSM2Q9Y333 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.49■□□□□ 0.71
LSM2Q9Y333 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM2Q9Y333 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM2Q9Y333 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM2Q9Y333 Z98882.1-201ENST00000622160 2253 ntBASIC19.49■□□□□ 0.71
LSM2Q9Y333 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LSM2Q9Y333 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.49■□□□□ 0.71
LSM2Q9Y333 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms