Protein–RNA interactions for Protein: Q9NZP8

C1RL, Complement C1r subcomponent-like protein, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RLQ9NZP8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
C1RLQ9NZP8 AC092068.2-201ENST00000590491 1708 ntBASIC17.89■□□□□ 0.46
C1RLQ9NZP8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
C1RLQ9NZP8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.89■□□□□ 0.45
C1RLQ9NZP8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.89■□□□□ 0.45
C1RLQ9NZP8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.89■□□□□ 0.45
C1RLQ9NZP8 pRNA.6-201ENST00000610482 90 ntBASIC17.89■□□□□ 0.45
C1RLQ9NZP8 pRNA.5-201ENST00000612139 90 ntBASIC17.89■□□□□ 0.45
C1RLQ9NZP8 pRNA.11-201ENST00000618423 90 ntBASIC17.89■□□□□ 0.45
C1RLQ9NZP8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.89■□□□□ 0.45
C1RLQ9NZP8 pRNA.13-201ENST00000619112 90 ntBASIC17.89■□□□□ 0.45
C1RLQ9NZP8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
C1RLQ9NZP8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
C1RLQ9NZP8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C1RLQ9NZP8 LINC01529-204ENST00000636474 1715 ntBASIC17.89■□□□□ 0.45
C1RLQ9NZP8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
C1RLQ9NZP8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C1RLQ9NZP8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 AC079630.1-202ENST00000618127 1840 ntBASIC17.87■□□□□ 0.45
C1RLQ9NZP8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 AC126544.1-201ENST00000580842 1059 ntBASIC17.87■□□□□ 0.45
C1RLQ9NZP8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
C1RLQ9NZP8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1RLQ9NZP8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
C1RLQ9NZP8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.86■□□□□ 0.45
C1RLQ9NZP8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.86■□□□□ 0.45
C1RLQ9NZP8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1RLQ9NZP8 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.86■□□□□ 0.45
C1RLQ9NZP8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.86■□□□□ 0.45
C1RLQ9NZP8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1RLQ9NZP8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1RLQ9NZP8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C1RLQ9NZP8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1RLQ9NZP8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1RLQ9NZP8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1RLQ9NZP8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C1RLQ9NZP8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
C1RLQ9NZP8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C1RLQ9NZP8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C1RLQ9NZP8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C1RLQ9NZP8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.85■□□□□ 0.45
C1RLQ9NZP8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C1RLQ9NZP8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
C1RLQ9NZP8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C1RLQ9NZP8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.85■□□□□ 0.45
C1RLQ9NZP8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C1RLQ9NZP8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.85■□□□□ 0.45
C1RLQ9NZP8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
C1RLQ9NZP8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C1RLQ9NZP8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C1RLQ9NZP8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 DUX4L4-201ENST00000566884 1269 ntBASIC17.84■□□□□ 0.45
C1RLQ9NZP8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C1RLQ9NZP8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms