Protein–RNA interactions for Protein: Q9H6Z4

RANBP3, Ran-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3Q9H6Z4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RANBP3Q9H6Z4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
RANBP3Q9H6Z4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RANBP3Q9H6Z4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19■□□□□ 0.63
RANBP3Q9H6Z4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RANBP3Q9H6Z4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RANBP3Q9H6Z4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.99■□□□□ 0.63
RANBP3Q9H6Z4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RANBP3Q9H6Z4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.99■□□□□ 0.63
RANBP3Q9H6Z4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RANBP3Q9H6Z4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
RANBP3Q9H6Z4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.99■□□□□ 0.63
RANBP3Q9H6Z4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RANBP3Q9H6Z4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.99■□□□□ 0.63
RANBP3Q9H6Z4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RANBP3Q9H6Z4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.99■□□□□ 0.63
RANBP3Q9H6Z4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.99■□□□□ 0.63
RANBP3Q9H6Z4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RANBP3Q9H6Z4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RANBP3Q9H6Z4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RANBP3Q9H6Z4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RANBP3Q9H6Z4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RANBP3Q9H6Z4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.96■□□□□ 0.63
RANBP3Q9H6Z4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RANBP3Q9H6Z4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RANBP3Q9H6Z4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.96■□□□□ 0.63
RANBP3Q9H6Z4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RANBP3Q9H6Z4 Z92544.1-202ENST00000571933 1220 ntBASIC18.96■□□□□ 0.63
RANBP3Q9H6Z4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.96■□□□□ 0.63
RANBP3Q9H6Z4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms