Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCNX3Q9H6A9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCNX3Q9H6A9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCNX3Q9H6A9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.02■□□□□ 0.79
PCNX3Q9H6A9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
PCNX3Q9H6A9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.02■□□□□ 0.79
PCNX3Q9H6A9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.01■□□□□ 0.79
PCNX3Q9H6A9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCNX3Q9H6A9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCNX3Q9H6A9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCNX3Q9H6A9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCNX3Q9H6A9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCNX3Q9H6A9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.01■□□□□ 0.79
PCNX3Q9H6A9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCNX3Q9H6A9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PCNX3Q9H6A9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCNX3Q9H6A9 AC008764.7-201ENST00000593779 1081 ntBASIC20■□□□□ 0.79
PCNX3Q9H6A9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCNX3Q9H6A9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20■□□□□ 0.79
PCNX3Q9H6A9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCNX3Q9H6A9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCNX3Q9H6A9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCNX3Q9H6A9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCNX3Q9H6A9 BX842568.3-201ENST00000418104 571 ntBASIC20■□□□□ 0.79
PCNX3Q9H6A9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20■□□□□ 0.79
PCNX3Q9H6A9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PCNX3Q9H6A9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCNX3Q9H6A9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 AC099791.1-201ENST00000416440 715 ntBASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 ZNRF2P3-201ENST00000424200 374 ntBASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 AL136967.2-201ENST00000623968 743 ntBASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCNX3Q9H6A9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 AC092171.4-201ENST00000609130 632 ntBASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PCNX3Q9H6A9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.97■□□□□ 0.79
PCNX3Q9H6A9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCNX3Q9H6A9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCNX3Q9H6A9 RASA4CP-201ENST00000424092 1398 ntBASIC19.97■□□□□ 0.79
PCNX3Q9H6A9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCNX3Q9H6A9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.97■□□□□ 0.79
PCNX3Q9H6A9 MIR939-201ENST00000401314 82 ntBASIC19.97■□□□□ 0.79
PCNX3Q9H6A9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.97■□□□□ 0.79
PCNX3Q9H6A9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCNX3Q9H6A9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCNX3Q9H6A9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.97■□□□□ 0.79
PCNX3Q9H6A9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.97■□□□□ 0.79
PCNX3Q9H6A9 AC233992.3-201ENST00000607491 485 ntBASIC19.97■□□□□ 0.79
PCNX3Q9H6A9 AC005837.3-201ENST00000612163 286 ntBASIC19.97■□□□□ 0.79
PCNX3Q9H6A9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
PCNX3Q9H6A9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PCNX3Q9H6A9 AC233723.2-201ENST00000623798 2106 ntBASIC19.96■□□□□ 0.79
PCNX3Q9H6A9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCNX3Q9H6A9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCNX3Q9H6A9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PCNX3Q9H6A9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCNX3Q9H6A9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCNX3Q9H6A9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PCNX3Q9H6A9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCNX3Q9H6A9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCNX3Q9H6A9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCNX3Q9H6A9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCNX3Q9H6A9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCNX3Q9H6A9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.95■□□□□ 0.78
PCNX3Q9H6A9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.95■□□□□ 0.78
PCNX3Q9H6A9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCNX3Q9H6A9 OR2I1P-207ENST00000453522 948 ntBASIC19.95■□□□□ 0.78
PCNX3Q9H6A9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCNX3Q9H6A9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCNX3Q9H6A9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCNX3Q9H6A9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCNX3Q9H6A9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCNX3Q9H6A9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCNX3Q9H6A9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCNX3Q9H6A9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms