Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 AC011270.2-201ENST00000624293 2550 ntBASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 AL139384.1-201ENST00000612143 3047 ntBASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CYSTM1Q9H1C7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CYSTM1Q9H1C7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC12.92□□□□□ -0.34
CYSTM1Q9H1C7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CYSTM1Q9H1C7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CYSTM1Q9H1C7 SMG8-203ENST00000578922 2178 ntBASIC12.92□□□□□ -0.34
CYSTM1Q9H1C7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CYSTM1Q9H1C7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC12.92□□□□□ -0.34
CYSTM1Q9H1C7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CYSTM1Q9H1C7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC12.92□□□□□ -0.34
CYSTM1Q9H1C7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC12.92□□□□□ -0.34
CYSTM1Q9H1C7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CYSTM1Q9H1C7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CYSTM1Q9H1C7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CYSTM1Q9H1C7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CYSTM1Q9H1C7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC12.91□□□□□ -0.34
CYSTM1Q9H1C7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CYSTM1Q9H1C7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CYSTM1Q9H1C7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CYSTM1Q9H1C7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC12.91□□□□□ -0.34
CYSTM1Q9H1C7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CYSTM1Q9H1C7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC12.91□□□□□ -0.34
CYSTM1Q9H1C7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
CYSTM1Q9H1C7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CYSTM1Q9H1C7 AC010542.4-201ENST00000563151 1910 ntBASIC12.91□□□□□ -0.34
CYSTM1Q9H1C7 ESRRAP2-201ENST00000418437 1549 ntBASIC12.91□□□□□ -0.34
CYSTM1Q9H1C7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC12.91□□□□□ -0.34
CYSTM1Q9H1C7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC12.91□□□□□ -0.34
CYSTM1Q9H1C7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CYSTM1Q9H1C7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CYSTM1Q9H1C7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CYSTM1Q9H1C7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CYSTM1Q9H1C7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CYSTM1Q9H1C7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 AC020916.1-201ENST00000587762 1774 ntBASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 AL032819.2-201ENST00000624543 2162 ntBASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms