Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 AC139530.1-201ENST00000575312 1977 ntBASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CMSS1Q9BQ75 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 MIR4508-201ENST00000584178 70 ntBASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 SNX5-217ENST00000606557 1087 ntBASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 C11orf96-202ENST00000528572 1834 ntBASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CMSS1Q9BQ75 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CMSS1Q9BQ75 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 AC080038.3-201ENST00000623346 1952 ntBASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CMSS1Q9BQ75 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CMSS1Q9BQ75 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CMSS1Q9BQ75 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CMSS1Q9BQ75 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CMSS1Q9BQ75 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CMSS1Q9BQ75 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.64■□□□□ 0.57
CMSS1Q9BQ75 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.64■□□□□ 0.57
CMSS1Q9BQ75 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.64■□□□□ 0.57
CMSS1Q9BQ75 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CMSS1Q9BQ75 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CMSS1Q9BQ75 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.63■□□□□ 0.57
CMSS1Q9BQ75 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.63■□□□□ 0.57
CMSS1Q9BQ75 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CMSS1Q9BQ75 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.63■□□□□ 0.57
CMSS1Q9BQ75 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms