Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.31■■□□□ 1
SLC38A3Q99624 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC38A3Q99624 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
SLC38A3Q99624 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.31■■□□□ 1
SLC38A3Q99624 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.31■■□□□ 1
SLC38A3Q99624 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.31■■□□□ 1
SLC38A3Q99624 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.31■■□□□ 1
SLC38A3Q99624 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.31■■□□□ 1
SLC38A3Q99624 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.31■■□□□ 1
SLC38A3Q99624 AC087239.1-201ENST00000622671 572 ntBASIC21.31■■□□□ 1
SLC38A3Q99624 AL031602.1-201ENST00000633169 911 ntBASIC21.31■■□□□ 1
SLC38A3Q99624 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.31■■□□□ 1
SLC38A3Q99624 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.31■■□□□ 1
SLC38A3Q99624 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.31■■□□□ 1
SLC38A3Q99624 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.31■■□□□ 1
SLC38A3Q99624 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC38A3Q99624 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.31■■□□□ 1
SLC38A3Q99624 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC38A3Q99624 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SLC38A3Q99624 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.3■■□□□ 1
SLC38A3Q99624 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.3■■□□□ 1
SLC38A3Q99624 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.3■■□□□ 1
SLC38A3Q99624 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC38A3Q99624 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.3■■□□□ 1
SLC38A3Q99624 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SLC38A3Q99624 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC38A3Q99624 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.3■■□□□ 1
SLC38A3Q99624 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC38A3Q99624 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.3■■□□□ 1
SLC38A3Q99624 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
SLC38A3Q99624 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.3■■□□□ 1
SLC38A3Q99624 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.29■■□□□ 1
SLC38A3Q99624 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SLC38A3Q99624 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.29■■□□□ 1
SLC38A3Q99624 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.29■■□□□ 1
SLC38A3Q99624 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.29■■□□□ 1
SLC38A3Q99624 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC38A3Q99624 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC38A3Q99624 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC38A3Q99624 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.29■■□□□ 1
SLC38A3Q99624 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.29■■□□□ 1
SLC38A3Q99624 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.29■■□□□ 1
SLC38A3Q99624 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC38A3Q99624 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC38A3Q99624 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC38A3Q99624 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.29■■□□□ 1
SLC38A3Q99624 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC38A3Q99624 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC38A3Q99624 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.28■■□□□ 1
SLC38A3Q99624 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC38A3Q99624 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC38A3Q99624 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.28■■□□□ 1
SLC38A3Q99624 ANOS2P-203ENST00000472227 1816 ntBASIC21.28■■□□□ 1
SLC38A3Q99624 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.28■■□□□ 1
SLC38A3Q99624 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.28■■□□□ 1
SLC38A3Q99624 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.28■■□□□ 1
SLC38A3Q99624 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.28■■□□□ 1
SLC38A3Q99624 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.28■■□□□ 1
SLC38A3Q99624 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC38A3Q99624 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC38A3Q99624 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC38A3Q99624 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC38A3Q99624 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC38A3Q99624 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.27■■□□□ 1
SLC38A3Q99624 LINC02228-203ENST00000641970 1355 ntBASIC21.27■■□□□ 1
SLC38A3Q99624 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
SLC38A3Q99624 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC38A3Q99624 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.27■■□□□ 1
SLC38A3Q99624 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.27■■□□□ 1
SLC38A3Q99624 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.27■■□□□ 1
SLC38A3Q99624 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.27■□□□□ 0.99
SLC38A3Q99624 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC38A3Q99624 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC38A3Q99624 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC38A3Q99624 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC38A3Q99624 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC38A3Q99624 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.26■□□□□ 0.99
SLC38A3Q99624 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.26■□□□□ 0.99
SLC38A3Q99624 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.26■□□□□ 0.99
SLC38A3Q99624 DUX4L2-201ENST00000561772 1275 ntBASIC21.26■□□□□ 0.99
SLC38A3Q99624 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.26■□□□□ 0.99
SLC38A3Q99624 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SLC38A3Q99624 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
SLC38A3Q99624 DUX4L6-201ENST00000626483 1275 ntBASIC21.26■□□□□ 0.99
SLC38A3Q99624 DUX4L1-201ENST00000627662 1275 ntBASIC21.26■□□□□ 0.99
SLC38A3Q99624 DUX4L8-201ENST00000629013 1275 ntBASIC21.26■□□□□ 0.99
SLC38A3Q99624 DUX4L3-201ENST00000630187 1275 ntBASIC21.26■□□□□ 0.99
SLC38A3Q99624 DUX4L7-201ENST00000630678 1275 ntBASIC21.26■□□□□ 0.99
SLC38A3Q99624 DUX4L5-201ENST00000630834 1275 ntBASIC21.26■□□□□ 0.99
SLC38A3Q99624 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC38A3Q99624 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC38A3Q99624 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC38A3Q99624 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC38A3Q99624 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC38A3Q99624 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC38A3Q99624 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC38A3Q99624 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC38A3Q99624 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC38A3Q99624 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC38A3Q99624 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms