Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
IFT43Q96FT9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.53■■□□□ 1.2
IFT43Q96FT9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
IFT43Q96FT9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
IFT43Q96FT9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.53■■□□□ 1.2
IFT43Q96FT9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
IFT43Q96FT9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
IFT43Q96FT9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
IFT43Q96FT9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
IFT43Q96FT9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.52■■□□□ 1.2
IFT43Q96FT9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.52■■□□□ 1.2
IFT43Q96FT9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.52■■□□□ 1.2
IFT43Q96FT9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
IFT43Q96FT9 DUX4L4-201ENST00000566884 1269 ntBASIC22.52■■□□□ 1.2
IFT43Q96FT9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.52■■□□□ 1.2
IFT43Q96FT9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
IFT43Q96FT9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
IFT43Q96FT9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.51■■□□□ 1.19
IFT43Q96FT9 AC241377.3-202ENST00000626088 1088 ntBASIC22.51■■□□□ 1.19
IFT43Q96FT9 AC241585.3-202ENST00000628937 1088 ntBASIC22.51■■□□□ 1.19
IFT43Q96FT9 AC245100.8-202ENST00000629247 1058 ntBASIC22.51■■□□□ 1.19
IFT43Q96FT9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
IFT43Q96FT9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
IFT43Q96FT9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.51■■□□□ 1.19
IFT43Q96FT9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
IFT43Q96FT9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.51■■□□□ 1.19
IFT43Q96FT9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
IFT43Q96FT9 SYT6-210ENST00000641643 1587 ntBASIC22.5■■□□□ 1.19
IFT43Q96FT9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
IFT43Q96FT9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.5■■□□□ 1.19
IFT43Q96FT9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
IFT43Q96FT9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
IFT43Q96FT9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
IFT43Q96FT9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.5■■□□□ 1.19
IFT43Q96FT9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
IFT43Q96FT9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
IFT43Q96FT9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
IFT43Q96FT9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.5■■□□□ 1.19
IFT43Q96FT9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
IFT43Q96FT9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
IFT43Q96FT9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
IFT43Q96FT9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
IFT43Q96FT9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
IFT43Q96FT9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
IFT43Q96FT9 C9orf163-202ENST00000624034 2573 ntBASIC22.49■■□□□ 1.19
IFT43Q96FT9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
IFT43Q96FT9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
IFT43Q96FT9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.49■■□□□ 1.19
IFT43Q96FT9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
IFT43Q96FT9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
IFT43Q96FT9 AL138724.1-201ENST00000606771 1088 ntBASIC22.49■■□□□ 1.19
IFT43Q96FT9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.49■■□□□ 1.19
IFT43Q96FT9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.49■■□□□ 1.19
IFT43Q96FT9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.48■■□□□ 1.19
IFT43Q96FT9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
IFT43Q96FT9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
IFT43Q96FT9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
IFT43Q96FT9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.48■■□□□ 1.19
IFT43Q96FT9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.48■■□□□ 1.19
IFT43Q96FT9 ZNRF2P3-201ENST00000424200 374 ntBASIC22.48■■□□□ 1.19
IFT43Q96FT9 AC009086.3-201ENST00000623486 1008 ntBASIC22.48■■□□□ 1.19
IFT43Q96FT9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
IFT43Q96FT9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.48■■□□□ 1.19
IFT43Q96FT9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.47■■□□□ 1.19
IFT43Q96FT9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
IFT43Q96FT9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
IFT43Q96FT9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
IFT43Q96FT9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.47■■□□□ 1.19
IFT43Q96FT9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
IFT43Q96FT9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
IFT43Q96FT9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.47■■□□□ 1.19
IFT43Q96FT9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
IFT43Q96FT9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
IFT43Q96FT9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
IFT43Q96FT9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
IFT43Q96FT9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.47■■□□□ 1.19
IFT43Q96FT9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
IFT43Q96FT9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.47■■□□□ 1.19
IFT43Q96FT9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
IFT43Q96FT9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.46■■□□□ 1.19
IFT43Q96FT9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.46■■□□□ 1.19
IFT43Q96FT9 AC099791.2-201ENST00000605725 427 ntBASIC22.46■■□□□ 1.19
IFT43Q96FT9 AL136967.2-201ENST00000623968 743 ntBASIC22.46■■□□□ 1.19
IFT43Q96FT9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
IFT43Q96FT9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
IFT43Q96FT9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.46■■□□□ 1.19
IFT43Q96FT9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
IFT43Q96FT9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
IFT43Q96FT9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
IFT43Q96FT9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.45■■□□□ 1.19
IFT43Q96FT9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
IFT43Q96FT9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
IFT43Q96FT9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.45■■□□□ 1.18
IFT43Q96FT9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
IFT43Q96FT9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
IFT43Q96FT9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
IFT43Q96FT9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
IFT43Q96FT9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.45■■□□□ 1.18
IFT43Q96FT9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
IFT43Q96FT9 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms