Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NMD3Q96D46 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NMD3Q96D46 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NMD3Q96D46 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NMD3Q96D46 AC090877.2-201ENST00000558441 1738 ntBASIC20.67■□□□□ 0.9
NMD3Q96D46 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NMD3Q96D46 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.67■□□□□ 0.9
NMD3Q96D46 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NMD3Q96D46 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NMD3Q96D46 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NMD3Q96D46 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NMD3Q96D46 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NMD3Q96D46 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NMD3Q96D46 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.66■□□□□ 0.9
NMD3Q96D46 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NMD3Q96D46 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NMD3Q96D46 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NMD3Q96D46 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.66■□□□□ 0.9
NMD3Q96D46 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NMD3Q96D46 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.66■□□□□ 0.9
NMD3Q96D46 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NMD3Q96D46 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NMD3Q96D46 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NMD3Q96D46 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NMD3Q96D46 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NMD3Q96D46 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NMD3Q96D46 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.65■□□□□ 0.9
NMD3Q96D46 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NMD3Q96D46 TSPY13P-201ENST00000338964 914 ntBASIC20.65■□□□□ 0.9
NMD3Q96D46 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.65■□□□□ 0.9
NMD3Q96D46 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.65■□□□□ 0.9
NMD3Q96D46 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
NMD3Q96D46 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NMD3Q96D46 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NMD3Q96D46 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NMD3Q96D46 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NMD3Q96D46 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NMD3Q96D46 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
NMD3Q96D46 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NMD3Q96D46 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NMD3Q96D46 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
NMD3Q96D46 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NMD3Q96D46 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
NMD3Q96D46 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NMD3Q96D46 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NMD3Q96D46 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NMD3Q96D46 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NMD3Q96D46 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NMD3Q96D46 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NMD3Q96D46 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NMD3Q96D46 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.63■□□□□ 0.89
NMD3Q96D46 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NMD3Q96D46 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
NMD3Q96D46 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NMD3Q96D46 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.63■□□□□ 0.89
NMD3Q96D46 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NMD3Q96D46 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NMD3Q96D46 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NMD3Q96D46 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.63■□□□□ 0.89
NMD3Q96D46 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NMD3Q96D46 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NMD3Q96D46 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.63■□□□□ 0.89
NMD3Q96D46 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.63■□□□□ 0.89
NMD3Q96D46 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NMD3Q96D46 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NMD3Q96D46 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.62■□□□□ 0.89
NMD3Q96D46 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NMD3Q96D46 AC092053.2-201ENST00000640557 1818 ntBASIC20.62■□□□□ 0.89
NMD3Q96D46 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
NMD3Q96D46 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.62■□□□□ 0.89
NMD3Q96D46 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NMD3Q96D46 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NMD3Q96D46 AC139795.1-202ENST00000500444 432 ntBASIC20.62■□□□□ 0.89
NMD3Q96D46 PVT1_1.1-201ENST00000615125 194 ntBASIC20.62■□□□□ 0.89
NMD3Q96D46 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NMD3Q96D46 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NMD3Q96D46 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NMD3Q96D46 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NMD3Q96D46 ESRRAP2-201ENST00000418437 1549 ntBASIC20.62■□□□□ 0.89
NMD3Q96D46 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NMD3Q96D46 AC005229.4-201ENST00000610085 2198 ntBASIC20.62■□□□□ 0.89
NMD3Q96D46 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NMD3Q96D46 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NMD3Q96D46 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NMD3Q96D46 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NMD3Q96D46 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NMD3Q96D46 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NMD3Q96D46 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NMD3Q96D46 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NMD3Q96D46 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NMD3Q96D46 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.61■□□□□ 0.89
NMD3Q96D46 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.61■□□□□ 0.89
NMD3Q96D46 AC012354.3-201ENST00000623734 483 ntBASIC20.61■□□□□ 0.89
NMD3Q96D46 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NMD3Q96D46 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NMD3Q96D46 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.61■□□□□ 0.89
NMD3Q96D46 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NMD3Q96D46 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NMD3Q96D46 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.61■□□□□ 0.89
NMD3Q96D46 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms