Protein–RNA interactions for Protein: Q96A99

PTX4, Pentraxin-4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4Q96A99 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.76■□□□□ 0.59
PTX4Q96A99 AC004987.1-201ENST00000428627 508 ntBASIC18.76■□□□□ 0.59
PTX4Q96A99 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.76■□□□□ 0.59
PTX4Q96A99 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.76■□□□□ 0.59
PTX4Q96A99 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTX4Q96A99 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTX4Q96A99 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTX4Q96A99 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.76■□□□□ 0.59
PTX4Q96A99 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTX4Q96A99 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.76■□□□□ 0.59
PTX4Q96A99 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
PTX4Q96A99 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTX4Q96A99 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTX4Q96A99 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTX4Q96A99 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTX4Q96A99 AC244015.2-201ENST00000616358 1861 ntBASIC18.75■□□□□ 0.59
PTX4Q96A99 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.75■□□□□ 0.59
PTX4Q96A99 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTX4Q96A99 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTX4Q96A99 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.75■□□□□ 0.59
PTX4Q96A99 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PTX4Q96A99 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.75■□□□□ 0.59
PTX4Q96A99 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.75■□□□□ 0.59
PTX4Q96A99 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.74■□□□□ 0.59
PTX4Q96A99 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTX4Q96A99 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.74■□□□□ 0.59
PTX4Q96A99 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTX4Q96A99 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTX4Q96A99 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTX4Q96A99 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTX4Q96A99 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTX4Q96A99 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTX4Q96A99 BHLHE23-202ENST00000612929 1109 ntBASIC18.74■□□□□ 0.59
PTX4Q96A99 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTX4Q96A99 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTX4Q96A99 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTX4Q96A99 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTX4Q96A99 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.74■□□□□ 0.59
PTX4Q96A99 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PTX4Q96A99 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTX4Q96A99 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.73■□□□□ 0.59
PTX4Q96A99 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTX4Q96A99 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTX4Q96A99 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PTX4Q96A99 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PTX4Q96A99 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTX4Q96A99 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTX4Q96A99 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.73■□□□□ 0.59
PTX4Q96A99 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.73■□□□□ 0.59
PTX4Q96A99 DUX4L4-201ENST00000566884 1269 ntBASIC18.73■□□□□ 0.59
PTX4Q96A99 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.73■□□□□ 0.59
PTX4Q96A99 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTX4Q96A99 CA15P2-201ENST00000611168 834 ntBASIC18.73■□□□□ 0.59
PTX4Q96A99 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PTX4Q96A99 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTX4Q96A99 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.73■□□□□ 0.59
PTX4Q96A99 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTX4Q96A99 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTX4Q96A99 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTX4Q96A99 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTX4Q96A99 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTX4Q96A99 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTX4Q96A99 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.72■□□□□ 0.59
PTX4Q96A99 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTX4Q96A99 TSPY13P-201ENST00000338964 914 ntBASIC18.72■□□□□ 0.59
PTX4Q96A99 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.72■□□□□ 0.59
PTX4Q96A99 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.72■□□□□ 0.59
PTX4Q96A99 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.72■□□□□ 0.59
PTX4Q96A99 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.72■□□□□ 0.59
PTX4Q96A99 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PTX4Q96A99 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTX4Q96A99 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTX4Q96A99 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTX4Q96A99 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTX4Q96A99 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTX4Q96A99 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
PTX4Q96A99 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTX4Q96A99 PVT1_1.1-201ENST00000615125 194 ntBASIC18.71■□□□□ 0.59
PTX4Q96A99 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PTX4Q96A99 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTX4Q96A99 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.71■□□□□ 0.59
PTX4Q96A99 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTX4Q96A99 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
PTX4Q96A99 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
PTX4Q96A99 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTX4Q96A99 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTX4Q96A99 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.7■□□□□ 0.58
PTX4Q96A99 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTX4Q96A99 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTX4Q96A99 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.7■□□□□ 0.58
PTX4Q96A99 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTX4Q96A99 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PTX4Q96A99 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTX4Q96A99 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.69■□□□□ 0.58
PTX4Q96A99 PKD1P6-201ENST00000343738 4769 ntBASIC18.69■□□□□ 0.58
PTX4Q96A99 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTX4Q96A99 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTX4Q96A99 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PTX4Q96A99 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTX4Q96A99 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms