Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
SMIM11BQ8TCY0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM11BQ8TCY0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM11BQ8TCY0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM11BQ8TCY0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.27□□□□□ -0.12
SMIM11BQ8TCY0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM11BQ8TCY0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC14.27□□□□□ -0.13
SMIM11BQ8TCY0 AC093536.1-201ENST00000569153 554 ntBASIC14.27□□□□□ -0.13
SMIM11BQ8TCY0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM11BQ8TCY0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM11BQ8TCY0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.27□□□□□ -0.13
SMIM11BQ8TCY0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM11BQ8TCY0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM11BQ8TCY0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM11BQ8TCY0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 RNF165-205ENST00000588679 2904 ntBASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM11BQ8TCY0 AL157384.1-201ENST00000445995 2473 ntBASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 LINC01521-201ENST00000504184 1943 ntBASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 AL353803.4-201ENST00000565882 1934 ntBASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM11BQ8TCY0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 AC060814.1-201ENST00000554326 538 ntBASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM11BQ8TCY0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11BQ8TCY0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11BQ8TCY0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11BQ8TCY0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11BQ8TCY0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11BQ8TCY0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11BQ8TCY0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11BQ8TCY0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM11BQ8TCY0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM11BQ8TCY0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
SMIM11BQ8TCY0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms