Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.3■□□□□ 0.68
LYSMD2Q8IV50 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD2Q8IV50 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD2Q8IV50 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD2Q8IV50 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD2Q8IV50 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD2Q8IV50 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD2Q8IV50 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD2Q8IV50 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD2Q8IV50 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.29■□□□□ 0.68
LYSMD2Q8IV50 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD2Q8IV50 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD2Q8IV50 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.29■□□□□ 0.68
LYSMD2Q8IV50 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.29■□□□□ 0.68
LYSMD2Q8IV50 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LYSMD2Q8IV50 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.29■□□□□ 0.68
LYSMD2Q8IV50 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD2Q8IV50 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD2Q8IV50 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD2Q8IV50 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 KRT18P10-201ENST00000388836 1287 ntBASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 AC016575.1-201ENST00000607026 382 ntBASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD2Q8IV50 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD2Q8IV50 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LYSMD2Q8IV50 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD2Q8IV50 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.27■□□□□ 0.68
LYSMD2Q8IV50 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.27■□□□□ 0.68
LYSMD2Q8IV50 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD2Q8IV50 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD2Q8IV50 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.27■□□□□ 0.68
LYSMD2Q8IV50 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.27■□□□□ 0.68
LYSMD2Q8IV50 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LYSMD2Q8IV50 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD2Q8IV50 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD2Q8IV50 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LYSMD2Q8IV50 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD2Q8IV50 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LYSMD2Q8IV50 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
LYSMD2Q8IV50 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LYSMD2Q8IV50 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LYSMD2Q8IV50 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LYSMD2Q8IV50 AC244015.2-201ENST00000616358 1861 ntBASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 LINC01006-201ENST00000333319 2292 ntBASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 ECEL1P2-201ENST00000461596 1295 ntBASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD2Q8IV50 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 AC087742.1-201ENST00000575880 1738 ntBASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD2Q8IV50 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms