Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.25■□□□□ 0.51
ZNF546Q86UE3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
ZNF546Q86UE3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF546Q86UE3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ZNF546Q86UE3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.24■□□□□ 0.51
ZNF546Q86UE3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF546Q86UE3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF546Q86UE3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
ZNF546Q86UE3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF546Q86UE3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF546Q86UE3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ZNF546Q86UE3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 AC060814.1-201ENST00000554326 538 ntBASIC18.23■□□□□ 0.51
ZNF546Q86UE3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF546Q86UE3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.22■□□□□ 0.51
ZNF546Q86UE3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.22■□□□□ 0.51
ZNF546Q86UE3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.22■□□□□ 0.51
ZNF546Q86UE3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.22■□□□□ 0.51
ZNF546Q86UE3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF546Q86UE3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.22■□□□□ 0.51
ZNF546Q86UE3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ZNF546Q86UE3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ZNF546Q86UE3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.22■□□□□ 0.51
ZNF546Q86UE3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF546Q86UE3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
ZNF546Q86UE3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ZNF546Q86UE3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.2■□□□□ 0.5
ZNF546Q86UE3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF546Q86UE3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF546Q86UE3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF546Q86UE3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ZNF546Q86UE3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF546Q86UE3 KRT18P10-201ENST00000388836 1287 ntBASIC18.2■□□□□ 0.5
ZNF546Q86UE3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.2■□□□□ 0.5
ZNF546Q86UE3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF546Q86UE3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
ZNF546Q86UE3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF546Q86UE3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF546Q86UE3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
ZNF546Q86UE3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF546Q86UE3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF546Q86UE3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ZNF546Q86UE3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF546Q86UE3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
ZNF546Q86UE3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF546Q86UE3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ZNF546Q86UE3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF546Q86UE3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
ZNF546Q86UE3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF546Q86UE3 AC016575.1-201ENST00000607026 382 ntBASIC18.19■□□□□ 0.5
ZNF546Q86UE3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF546Q86UE3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
ZNF546Q86UE3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
ZNF546Q86UE3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF546Q86UE3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF546Q86UE3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ZNF546Q86UE3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
ZNF546Q86UE3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF546Q86UE3 RP9P-202ENST00000450133 1212 ntBASIC18.18■□□□□ 0.5
ZNF546Q86UE3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF546Q86UE3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF546Q86UE3 AC007952.6-201ENST00000573168 2673 ntBASIC18.18■□□□□ 0.5
ZNF546Q86UE3 AC003957.1-201ENST00000625108 2673 ntBASIC18.18■□□□□ 0.5
ZNF546Q86UE3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms