Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
LYSMD3Q7Z3D4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.1■■□□□ 1.13
LYSMD3Q7Z3D4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.1■■□□□ 1.13
LYSMD3Q7Z3D4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.1■■□□□ 1.13
LYSMD3Q7Z3D4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.1■■□□□ 1.13
LYSMD3Q7Z3D4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LYSMD3Q7Z3D4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
LYSMD3Q7Z3D4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LYSMD3Q7Z3D4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
LYSMD3Q7Z3D4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.09■■□□□ 1.13
LYSMD3Q7Z3D4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.09■■□□□ 1.13
LYSMD3Q7Z3D4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
LYSMD3Q7Z3D4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.09■■□□□ 1.13
LYSMD3Q7Z3D4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LYSMD3Q7Z3D4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LYSMD3Q7Z3D4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LYSMD3Q7Z3D4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
LYSMD3Q7Z3D4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.09■■□□□ 1.13
LYSMD3Q7Z3D4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LYSMD3Q7Z3D4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
LYSMD3Q7Z3D4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.08■■□□□ 1.13
LYSMD3Q7Z3D4 AC010525.1-201ENST00000585559 441 ntBASIC22.08■■□□□ 1.13
LYSMD3Q7Z3D4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.08■■□□□ 1.13
LYSMD3Q7Z3D4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
LYSMD3Q7Z3D4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
LYSMD3Q7Z3D4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
LYSMD3Q7Z3D4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
LYSMD3Q7Z3D4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD3Q7Z3D4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
LYSMD3Q7Z3D4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.07■■□□□ 1.12
LYSMD3Q7Z3D4 AC005837.3-201ENST00000612163 286 ntBASIC22.07■■□□□ 1.12
LYSMD3Q7Z3D4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.07■■□□□ 1.12
LYSMD3Q7Z3D4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.07■■□□□ 1.12
LYSMD3Q7Z3D4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD3Q7Z3D4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.07■■□□□ 1.12
LYSMD3Q7Z3D4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD3Q7Z3D4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD3Q7Z3D4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD3Q7Z3D4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.06■■□□□ 1.12
LYSMD3Q7Z3D4 SLC47A1P1-202ENST00000449666 945 ntBASIC22.06■■□□□ 1.12
LYSMD3Q7Z3D4 OR2I1P-207ENST00000453522 948 ntBASIC22.06■■□□□ 1.12
LYSMD3Q7Z3D4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.06■■□□□ 1.12
LYSMD3Q7Z3D4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.06■■□□□ 1.12
LYSMD3Q7Z3D4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.06■■□□□ 1.12
LYSMD3Q7Z3D4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.06■■□□□ 1.12
LYSMD3Q7Z3D4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD3Q7Z3D4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.06■■□□□ 1.12
LYSMD3Q7Z3D4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD3Q7Z3D4 C1orf229-201ENST00000623686 2258 ntBASIC22.05■■□□□ 1.12
LYSMD3Q7Z3D4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
LYSMD3Q7Z3D4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
LYSMD3Q7Z3D4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LYSMD3Q7Z3D4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
LYSMD3Q7Z3D4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
LYSMD3Q7Z3D4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.05■■□□□ 1.12
LYSMD3Q7Z3D4 MIR935-201ENST00000401179 91 ntBASIC22.05■■□□□ 1.12
LYSMD3Q7Z3D4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
LYSMD3Q7Z3D4 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.05■■□□□ 1.12
LYSMD3Q7Z3D4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LYSMD3Q7Z3D4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LYSMD3Q7Z3D4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LYSMD3Q7Z3D4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LYSMD3Q7Z3D4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LYSMD3Q7Z3D4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.04■■□□□ 1.12
LYSMD3Q7Z3D4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LYSMD3Q7Z3D4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.04■■□□□ 1.12
LYSMD3Q7Z3D4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
LYSMD3Q7Z3D4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LYSMD3Q7Z3D4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LYSMD3Q7Z3D4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LYSMD3Q7Z3D4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
LYSMD3Q7Z3D4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LYSMD3Q7Z3D4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.04■■□□□ 1.12
LYSMD3Q7Z3D4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
LYSMD3Q7Z3D4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.03■■□□□ 1.12
LYSMD3Q7Z3D4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
LYSMD3Q7Z3D4 EDA-201ENST00000338901 1233 ntBASIC22.03■■□□□ 1.12
LYSMD3Q7Z3D4 AL031432.3-201ENST00000607698 485 ntBASIC22.03■■□□□ 1.12
LYSMD3Q7Z3D4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
LYSMD3Q7Z3D4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LYSMD3Q7Z3D4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
LYSMD3Q7Z3D4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD3Q7Z3D4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
LYSMD3Q7Z3D4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.01■■□□□ 1.11
LYSMD3Q7Z3D4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms