Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
NIPAL3Q6P499 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NIPAL3Q6P499 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NIPAL3Q6P499 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NIPAL3Q6P499 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.96■□□□□ 0.79
NIPAL3Q6P499 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NIPAL3Q6P499 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NIPAL3Q6P499 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.96■□□□□ 0.79
NIPAL3Q6P499 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.96■□□□□ 0.79
NIPAL3Q6P499 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.96■□□□□ 0.79
NIPAL3Q6P499 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
NIPAL3Q6P499 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NIPAL3Q6P499 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NIPAL3Q6P499 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NIPAL3Q6P499 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 AC092053.2-201ENST00000640557 1818 ntBASIC19.94■□□□□ 0.78
NIPAL3Q6P499 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.94■□□□□ 0.78
NIPAL3Q6P499 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
NIPAL3Q6P499 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NIPAL3Q6P499 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
NIPAL3Q6P499 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NIPAL3Q6P499 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.93■□□□□ 0.78
NIPAL3Q6P499 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.93■□□□□ 0.78
NIPAL3Q6P499 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NIPAL3Q6P499 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NIPAL3Q6P499 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NIPAL3Q6P499 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NIPAL3Q6P499 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NIPAL3Q6P499 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NIPAL3Q6P499 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NIPAL3Q6P499 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NIPAL3Q6P499 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NIPAL3Q6P499 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NIPAL3Q6P499 AC007375.3-201ENST00000600936 2314 ntBASIC19.92■□□□□ 0.78
NIPAL3Q6P499 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NIPAL3Q6P499 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NIPAL3Q6P499 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.92■□□□□ 0.78
NIPAL3Q6P499 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.92■□□□□ 0.78
NIPAL3Q6P499 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NIPAL3Q6P499 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.92■□□□□ 0.78
NIPAL3Q6P499 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.92■□□□□ 0.78
NIPAL3Q6P499 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.92■□□□□ 0.78
NIPAL3Q6P499 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NIPAL3Q6P499 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms