Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL13A1Q5TAT6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL13A1Q5TAT6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL13A1Q5TAT6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL13A1Q5TAT6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC25.37■■□□□ 1.65
COL13A1Q5TAT6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
COL13A1Q5TAT6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.37■■□□□ 1.65
COL13A1Q5TAT6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.37■■□□□ 1.65
COL13A1Q5TAT6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.37■■□□□ 1.65
COL13A1Q5TAT6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.37■■□□□ 1.65
COL13A1Q5TAT6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL13A1Q5TAT6 FAM197Y4-202ENST00000622692 608 ntBASIC25.37■■□□□ 1.65
COL13A1Q5TAT6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
COL13A1Q5TAT6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
COL13A1Q5TAT6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL13A1Q5TAT6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL13A1Q5TAT6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC25.36■■□□□ 1.65
COL13A1Q5TAT6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL13A1Q5TAT6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.35■■□□□ 1.65
COL13A1Q5TAT6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL13A1Q5TAT6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.35■■□□□ 1.65
COL13A1Q5TAT6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL13A1Q5TAT6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
COL13A1Q5TAT6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL13A1Q5TAT6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC25.35■■□□□ 1.65
COL13A1Q5TAT6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC25.35■■□□□ 1.65
COL13A1Q5TAT6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC25.35■■□□□ 1.65
COL13A1Q5TAT6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL13A1Q5TAT6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL13A1Q5TAT6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL13A1Q5TAT6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL13A1Q5TAT6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL13A1Q5TAT6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.34■■□□□ 1.65
COL13A1Q5TAT6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.34■■□□□ 1.65
COL13A1Q5TAT6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL13A1Q5TAT6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL13A1Q5TAT6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC25.34■■□□□ 1.65
COL13A1Q5TAT6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL13A1Q5TAT6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.34■■□□□ 1.65
COL13A1Q5TAT6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.34■■□□□ 1.65
COL13A1Q5TAT6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL13A1Q5TAT6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL13A1Q5TAT6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.33■■□□□ 1.65
COL13A1Q5TAT6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC25.33■■□□□ 1.65
COL13A1Q5TAT6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL13A1Q5TAT6 AP003097.1-201ENST00000530657 1135 ntBASIC25.33■■□□□ 1.65
COL13A1Q5TAT6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.33■■□□□ 1.65
COL13A1Q5TAT6 RN7SL850P-201ENST00000579959 291 ntBASIC25.33■■□□□ 1.65
COL13A1Q5TAT6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC25.33■■□□□ 1.65
COL13A1Q5TAT6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
COL13A1Q5TAT6 AC097493.4-201ENST00000641197 219 ntBASIC25.33■■□□□ 1.65
COL13A1Q5TAT6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL13A1Q5TAT6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL13A1Q5TAT6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
COL13A1Q5TAT6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL13A1Q5TAT6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.32■■□□□ 1.64
COL13A1Q5TAT6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC25.32■■□□□ 1.64
COL13A1Q5TAT6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC25.32■■□□□ 1.64
COL13A1Q5TAT6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL13A1Q5TAT6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC25.32■■□□□ 1.64
COL13A1Q5TAT6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC25.32■■□□□ 1.64
COL13A1Q5TAT6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.32■■□□□ 1.64
COL13A1Q5TAT6 AL590326.2-201ENST00000625139 305 ntBASIC25.32■■□□□ 1.64
COL13A1Q5TAT6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL13A1Q5TAT6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL13A1Q5TAT6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL13A1Q5TAT6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 AC087499.1-201ENST00000418141 1075 ntBASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 RPPH1-201ENST00000516869 333 ntBASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 AC012306.2-201ENST00000609350 630 ntBASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
COL13A1Q5TAT6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL13A1Q5TAT6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL13A1Q5TAT6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.3■■□□□ 1.64
COL13A1Q5TAT6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.3■■□□□ 1.64
COL13A1Q5TAT6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.3■■□□□ 1.64
COL13A1Q5TAT6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL13A1Q5TAT6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL13A1Q5TAT6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.3■■□□□ 1.64
COL13A1Q5TAT6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL13A1Q5TAT6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL13A1Q5TAT6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL13A1Q5TAT6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
COL13A1Q5TAT6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL13A1Q5TAT6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
COL13A1Q5TAT6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC25.29■■□□□ 1.64
COL13A1Q5TAT6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
COL13A1Q5TAT6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms