Protein–RNA interactions for Protein: Q3LHN1

KRTAP21-3, Keratin-associated protein 21-3, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP21-3Q3LHN1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRTAP21-3Q3LHN1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KRTAP21-3Q3LHN1 OR10C1-204ENST00000622521 1039 ntBASIC17.59■□□□□ 0.41
KRTAP21-3Q3LHN1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
KRTAP21-3Q3LHN1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
KRTAP21-3Q3LHN1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRTAP21-3Q3LHN1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
KRTAP21-3Q3LHN1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRTAP21-3Q3LHN1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRTAP21-3Q3LHN1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRTAP21-3Q3LHN1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRTAP21-3Q3LHN1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.58■□□□□ 0.4
KRTAP21-3Q3LHN1 RPPH1-201ENST00000516869 333 ntBASIC17.58■□□□□ 0.4
KRTAP21-3Q3LHN1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.58■□□□□ 0.4
KRTAP21-3Q3LHN1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.58■□□□□ 0.4
KRTAP21-3Q3LHN1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRTAP21-3Q3LHN1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.58■□□□□ 0.4
KRTAP21-3Q3LHN1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KRTAP21-3Q3LHN1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
KRTAP21-3Q3LHN1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KRTAP21-3Q3LHN1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRTAP21-3Q3LHN1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRTAP21-3Q3LHN1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRTAP21-3Q3LHN1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.57■□□□□ 0.4
KRTAP21-3Q3LHN1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KRTAP21-3Q3LHN1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
KRTAP21-3Q3LHN1 CYP2T3P-201ENST00000601990 817 ntBASIC17.57■□□□□ 0.4
KRTAP21-3Q3LHN1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.57■□□□□ 0.4
KRTAP21-3Q3LHN1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRTAP21-3Q3LHN1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRTAP21-3Q3LHN1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRTAP21-3Q3LHN1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRTAP21-3Q3LHN1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
KRTAP21-3Q3LHN1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.56■□□□□ 0.4
KRTAP21-3Q3LHN1 POU5F1P4-201ENST00000413175 1085 ntBASIC17.56■□□□□ 0.4
KRTAP21-3Q3LHN1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.56■□□□□ 0.4
KRTAP21-3Q3LHN1 RN7SL850P-201ENST00000579959 291 ntBASIC17.56■□□□□ 0.4
KRTAP21-3Q3LHN1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRTAP21-3Q3LHN1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRTAP21-3Q3LHN1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRTAP21-3Q3LHN1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRTAP21-3Q3LHN1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.56■□□□□ 0.4
KRTAP21-3Q3LHN1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRTAP21-3Q3LHN1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRTAP21-3Q3LHN1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
KRTAP21-3Q3LHN1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
KRTAP21-3Q3LHN1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRTAP21-3Q3LHN1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRTAP21-3Q3LHN1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRTAP21-3Q3LHN1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRTAP21-3Q3LHN1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRTAP21-3Q3LHN1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRTAP21-3Q3LHN1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.55■□□□□ 0.4
KRTAP21-3Q3LHN1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.55■□□□□ 0.4
KRTAP21-3Q3LHN1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 AC104187.1-201ENST00000607510 612 ntBASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.54■□□□□ 0.4
KRTAP21-3Q3LHN1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.53■□□□□ 0.4
KRTAP21-3Q3LHN1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRTAP21-3Q3LHN1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRTAP21-3Q3LHN1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.53■□□□□ 0.4
KRTAP21-3Q3LHN1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRTAP21-3Q3LHN1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRTAP21-3Q3LHN1 AC012618.2-201ENST00000428058 849 ntBASIC17.53■□□□□ 0.4
KRTAP21-3Q3LHN1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.53■□□□□ 0.4
KRTAP21-3Q3LHN1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.53■□□□□ 0.4
KRTAP21-3Q3LHN1 AC091874.3-201ENST00000512672 1195 ntBASIC17.53■□□□□ 0.4
KRTAP21-3Q3LHN1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.53■□□□□ 0.4
KRTAP21-3Q3LHN1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.53■□□□□ 0.4
KRTAP21-3Q3LHN1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
KRTAP21-3Q3LHN1 AC142472.1-201ENST00000612013 1741 ntBASIC17.52■□□□□ 0.4
KRTAP21-3Q3LHN1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRTAP21-3Q3LHN1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRTAP21-3Q3LHN1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.52■□□□□ 0.4
KRTAP21-3Q3LHN1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.52■□□□□ 0.4
KRTAP21-3Q3LHN1 AC010536.3-201ENST00000620306 533 ntBASIC17.52■□□□□ 0.4
KRTAP21-3Q3LHN1 AC013268.1-206ENST00000638368 961 ntBASIC17.52■□□□□ 0.4
KRTAP21-3Q3LHN1 AC112229.1-201ENST00000639295 961 ntBASIC17.52■□□□□ 0.4
KRTAP21-3Q3LHN1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
KRTAP21-3Q3LHN1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
KRTAP21-3Q3LHN1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.52■□□□□ 0.39
KRTAP21-3Q3LHN1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRTAP21-3Q3LHN1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 604.5 ms