Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 SRD5A1P1-201ENST00000442297 786 ntBASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 AC131281.2-201ENST00000520478 145 ntBASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 AC133637.1-201ENST00000624115 1537 ntBASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RSPO1Q2MKA7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO1Q2MKA7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RSPO1Q2MKA7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO1Q2MKA7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
RSPO1Q2MKA7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO1Q2MKA7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO1Q2MKA7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO1Q2MKA7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RSPO1Q2MKA7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO1Q2MKA7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RSPO1Q2MKA7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RSPO1Q2MKA7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.11■□□□□ 0.65
RSPO1Q2MKA7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
RSPO1Q2MKA7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.11■□□□□ 0.65
RSPO1Q2MKA7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RSPO1Q2MKA7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.11■□□□□ 0.65
RSPO1Q2MKA7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RSPO1Q2MKA7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 AC137767.1-201ENST00000602918 1920 ntBASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.1■□□□□ 0.65
RSPO1Q2MKA7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO1Q2MKA7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO1Q2MKA7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO1Q2MKA7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO1Q2MKA7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO1Q2MKA7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.09■□□□□ 0.65
RSPO1Q2MKA7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO1Q2MKA7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.09■□□□□ 0.65
RSPO1Q2MKA7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RSPO1Q2MKA7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.09■□□□□ 0.65
RSPO1Q2MKA7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO1Q2MKA7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RSPO1Q2MKA7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RSPO1Q2MKA7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RSPO1Q2MKA7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.08■□□□□ 0.65
RSPO1Q2MKA7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RSPO1Q2MKA7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RSPO1Q2MKA7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RSPO1Q2MKA7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RSPO1Q2MKA7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.08■□□□□ 0.64
RSPO1Q2MKA7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.08■□□□□ 0.64
RSPO1Q2MKA7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
RSPO1Q2MKA7 CA15P2-201ENST00000611168 834 ntBASIC19.08■□□□□ 0.64
RSPO1Q2MKA7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.08■□□□□ 0.64
RSPO1Q2MKA7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RSPO1Q2MKA7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RSPO1Q2MKA7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RSPO1Q2MKA7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.08■□□□□ 0.64
RSPO1Q2MKA7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RSPO1Q2MKA7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RSPO1Q2MKA7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms