Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SKP1P63208 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.85■□□□□ 0.93
SKP1P63208 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SKP1P63208 MIR939-201ENST00000401314 82 ntBASIC20.85■□□□□ 0.93
SKP1P63208 AC126544.1-201ENST00000580842 1059 ntBASIC20.85■□□□□ 0.93
SKP1P63208 AC008764.7-201ENST00000593779 1081 ntBASIC20.85■□□□□ 0.93
SKP1P63208 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.85■□□□□ 0.93
SKP1P63208 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SKP1P63208 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SKP1P63208 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SKP1P63208 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SKP1P63208 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.84■□□□□ 0.93
SKP1P63208 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.84■□□□□ 0.93
SKP1P63208 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.84■□□□□ 0.93
SKP1P63208 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SKP1P63208 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SKP1P63208 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.84■□□□□ 0.93
SKP1P63208 AP005435.1-201ENST00000529293 1178 ntBASIC20.84■□□□□ 0.93
SKP1P63208 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.84■□□□□ 0.93
SKP1P63208 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.84■□□□□ 0.93
SKP1P63208 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SKP1P63208 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SKP1P63208 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SKP1P63208 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SKP1P63208 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.83■□□□□ 0.93
SKP1P63208 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SKP1P63208 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKP1P63208 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SKP1P63208 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SKP1P63208 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.83■□□□□ 0.93
SKP1P63208 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SKP1P63208 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKP1P63208 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SKP1P63208 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SKP1P63208 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKP1P63208 AC099791.1-201ENST00000416440 715 ntBASIC20.83■□□□□ 0.93
SKP1P63208 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.83■□□□□ 0.93
SKP1P63208 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SKP1P63208 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SKP1P63208 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SKP1P63208 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SKP1P63208 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SKP1P63208 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SKP1P63208 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.83■□□□□ 0.92
SKP1P63208 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.83■□□□□ 0.92
SKP1P63208 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SKP1P63208 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.82■□□□□ 0.92
SKP1P63208 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.82■□□□□ 0.92
SKP1P63208 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.82■□□□□ 0.92
SKP1P63208 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKP1P63208 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKP1P63208 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SKP1P63208 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKP1P63208 SUDS3P1-201ENST00000505831 966 ntBASIC20.82■□□□□ 0.92
SKP1P63208 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.82■□□□□ 0.92
SKP1P63208 AL031432.3-201ENST00000607698 485 ntBASIC20.82■□□□□ 0.92
SKP1P63208 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKP1P63208 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKP1P63208 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKP1P63208 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SKP1P63208 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SKP1P63208 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.81■□□□□ 0.92
SKP1P63208 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SKP1P63208 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.81■□□□□ 0.92
SKP1P63208 AL136967.2-201ENST00000623968 743 ntBASIC20.81■□□□□ 0.92
SKP1P63208 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SKP1P63208 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SKP1P63208 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SKP1P63208 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.81■□□□□ 0.92
SKP1P63208 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SKP1P63208 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.8■□□□□ 0.92
SKP1P63208 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.8■□□□□ 0.92
SKP1P63208 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SKP1P63208 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SKP1P63208 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SKP1P63208 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SKP1P63208 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SKP1P63208 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.8■□□□□ 0.92
SKP1P63208 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SKP1P63208 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SKP1P63208 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SKP1P63208 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SKP1P63208 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SKP1P63208 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.79■□□□□ 0.92
SKP1P63208 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SKP1P63208 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.79■□□□□ 0.92
SKP1P63208 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SKP1P63208 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SKP1P63208 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.79■□□□□ 0.92
SKP1P63208 CA15P2-201ENST00000611168 834 ntBASIC20.79■□□□□ 0.92
SKP1P63208 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SKP1P63208 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.79■□□□□ 0.92
SKP1P63208 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.78■□□□□ 0.92
SKP1P63208 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SKP1P63208 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SKP1P63208 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.78■□□□□ 0.92
SKP1P63208 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.78■□□□□ 0.92
SKP1P63208 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SKP1P63208 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SKP1P63208 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms