Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.23■□□□□ 0.99
EPHA4P54764 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.23■□□□□ 0.99
EPHA4P54764 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.23■□□□□ 0.99
EPHA4P54764 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.23■□□□□ 0.99
EPHA4P54764 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.23■□□□□ 0.99
EPHA4P54764 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EPHA4P54764 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPHA4P54764 LINC02228-203ENST00000641970 1355 ntBASIC21.23■□□□□ 0.99
EPHA4P54764 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA4P54764 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.22■□□□□ 0.99
EPHA4P54764 AC092068.2-201ENST00000590491 1708 ntBASIC21.22■□□□□ 0.99
EPHA4P54764 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA4P54764 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA4P54764 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
EPHA4P54764 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.22■□□□□ 0.99
EPHA4P54764 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.22■□□□□ 0.99
EPHA4P54764 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.22■□□□□ 0.99
EPHA4P54764 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.22■□□□□ 0.99
EPHA4P54764 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.22■□□□□ 0.99
EPHA4P54764 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA4P54764 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.22■□□□□ 0.99
EPHA4P54764 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.22■□□□□ 0.99
EPHA4P54764 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
EPHA4P54764 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA4P54764 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.22■□□□□ 0.99
EPHA4P54764 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.22■□□□□ 0.99
EPHA4P54764 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA4P54764 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA4P54764 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA4P54764 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA4P54764 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPHA4P54764 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
EPHA4P54764 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EPHA4P54764 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
EPHA4P54764 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.21■□□□□ 0.99
EPHA4P54764 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHA4P54764 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHA4P54764 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.21■□□□□ 0.99
EPHA4P54764 AC010141.3-201ENST00000456659 717 ntBASIC21.21■□□□□ 0.99
EPHA4P54764 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.21■□□□□ 0.99
EPHA4P54764 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EPHA4P54764 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.21■□□□□ 0.99
EPHA4P54764 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.21■□□□□ 0.99
EPHA4P54764 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHA4P54764 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
EPHA4P54764 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.21■□□□□ 0.99
EPHA4P54764 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.2■□□□□ 0.98
EPHA4P54764 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EPHA4P54764 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EPHA4P54764 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.2■□□□□ 0.98
EPHA4P54764 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.2■□□□□ 0.98
EPHA4P54764 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.2■□□□□ 0.98
EPHA4P54764 DUX4L2-201ENST00000561772 1275 ntBASIC21.2■□□□□ 0.98
EPHA4P54764 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
EPHA4P54764 DUX4L6-201ENST00000626483 1275 ntBASIC21.2■□□□□ 0.98
EPHA4P54764 DUX4L1-201ENST00000627662 1275 ntBASIC21.2■□□□□ 0.98
EPHA4P54764 DUX4L8-201ENST00000629013 1275 ntBASIC21.2■□□□□ 0.98
EPHA4P54764 DUX4L3-201ENST00000630187 1275 ntBASIC21.2■□□□□ 0.98
EPHA4P54764 DUX4L7-201ENST00000630678 1275 ntBASIC21.2■□□□□ 0.98
EPHA4P54764 DUX4L5-201ENST00000630834 1275 ntBASIC21.2■□□□□ 0.98
EPHA4P54764 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EPHA4P54764 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.2■□□□□ 0.98
EPHA4P54764 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
EPHA4P54764 ANOS2P-203ENST00000472227 1816 ntBASIC21.2■□□□□ 0.98
EPHA4P54764 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EPHA4P54764 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.2■□□□□ 0.98
EPHA4P54764 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
EPHA4P54764 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
EPHA4P54764 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA4P54764 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA4P54764 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA4P54764 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA4P54764 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.19■□□□□ 0.98
EPHA4P54764 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
EPHA4P54764 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
EPHA4P54764 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.19■□□□□ 0.98
EPHA4P54764 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.19■□□□□ 0.98
EPHA4P54764 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.19■□□□□ 0.98
EPHA4P54764 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.19■□□□□ 0.98
EPHA4P54764 CCDC92B-201ENST00000575506 885 ntBASIC21.19■□□□□ 0.98
EPHA4P54764 TERF1P2-201ENST00000583350 1212 ntBASIC21.19■□□□□ 0.98
EPHA4P54764 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
EPHA4P54764 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EPHA4P54764 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
EPHA4P54764 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.19■□□□□ 0.98
EPHA4P54764 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.19■□□□□ 0.98
EPHA4P54764 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.19■□□□□ 0.98
EPHA4P54764 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.19■□□□□ 0.98
EPHA4P54764 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA4P54764 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
EPHA4P54764 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
EPHA4P54764 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA4P54764 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA4P54764 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
EPHA4P54764 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
EPHA4P54764 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.18■□□□□ 0.98
EPHA4P54764 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EPHA4P54764 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
EPHA4P54764 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
EPHA4P54764 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms