Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3BP20337 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RAB3BP20337 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RAB3BP20337 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB3BP20337 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3BP20337 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RAB3BP20337 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RAB3BP20337 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RAB3BP20337 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3BP20337 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB3BP20337 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB3BP20337 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3BP20337 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3BP20337 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB3BP20337 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RAB3BP20337 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3BP20337 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3BP20337 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3BP20337 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3BP20337 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3BP20337 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3BP20337 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3BP20337 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3BP20337 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3BP20337 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3BP20337 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3BP20337 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB3BP20337 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3BP20337 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAB3BP20337 AC144652.1-201ENST00000609974 1624 ntBASIC19.2■□□□□ 0.66
RAB3BP20337 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3BP20337 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3BP20337 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3BP20337 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3BP20337 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB3BP20337 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3BP20337 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3BP20337 AC022616.5-201ENST00000518796 181 ntBASIC19.19■□□□□ 0.66
RAB3BP20337 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.19■□□□□ 0.66
RAB3BP20337 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3BP20337 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3BP20337 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3BP20337 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3BP20337 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3BP20337 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RAB3BP20337 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB3BP20337 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3BP20337 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RAB3BP20337 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB3BP20337 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3BP20337 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3BP20337 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3BP20337 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3BP20337 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3BP20337 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3BP20337 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RAB3BP20337 AC005229.4-201ENST00000610085 2198 ntBASIC19.18■□□□□ 0.66
RAB3BP20337 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB3BP20337 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RAB3BP20337 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3BP20337 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB3BP20337 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3BP20337 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3BP20337 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB3BP20337 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB3BP20337 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB3BP20337 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RAB3BP20337 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3BP20337 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3BP20337 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.17■□□□□ 0.66
RAB3BP20337 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB3BP20337 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
RAB3BP20337 AC004448.1-201ENST00000458332 883 ntBASIC19.17■□□□□ 0.66
RAB3BP20337 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3BP20337 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.17■□□□□ 0.66
RAB3BP20337 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3BP20337 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3BP20337 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3BP20337 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3BP20337 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3BP20337 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3BP20337 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3BP20337 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3BP20337 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RAB3BP20337 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3BP20337 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3BP20337 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB3BP20337 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB3BP20337 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3BP20337 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RAB3BP20337 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RAB3BP20337 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3BP20337 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3BP20337 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB3BP20337 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.15■□□□□ 0.66
RAB3BP20337 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB3BP20337 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3BP20337 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RAB3BP20337 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3BP20337 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms