Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD53P19397 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
CD53P19397 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD53P19397 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CD53P19397 AC024257.2-201ENST00000549699 147 ntBASIC19.89■□□□□ 0.77
CD53P19397 MIR5787-201ENST00000611784 55 ntBASIC19.89■□□□□ 0.77
CD53P19397 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.89■□□□□ 0.77
CD53P19397 AL355001.2-201ENST00000620617 1191 ntBASIC19.89■□□□□ 0.77
CD53P19397 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD53P19397 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CD53P19397 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CD53P19397 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD53P19397 ALDH1A3-203ENST00000557963 1670 ntBASIC19.88■□□□□ 0.77
CD53P19397 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.88■□□□□ 0.77
CD53P19397 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD53P19397 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD53P19397 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD53P19397 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.88■□□□□ 0.77
CD53P19397 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD53P19397 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD53P19397 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD53P19397 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD53P19397 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.87■□□□□ 0.77
CD53P19397 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD53P19397 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD53P19397 AC104564.3-201ENST00000582367 638 ntBASIC19.87■□□□□ 0.77
CD53P19397 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD53P19397 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD53P19397 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD53P19397 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.86■□□□□ 0.77
CD53P19397 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.86■□□□□ 0.77
CD53P19397 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD53P19397 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.86■□□□□ 0.77
CD53P19397 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD53P19397 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CD53P19397 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CD53P19397 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.86■□□□□ 0.77
CD53P19397 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD53P19397 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CD53P19397 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CD53P19397 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CD53P19397 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.85■□□□□ 0.77
CD53P19397 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD53P19397 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD53P19397 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD53P19397 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD53P19397 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD53P19397 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD53P19397 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.85■□□□□ 0.77
CD53P19397 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CD53P19397 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD53P19397 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CD53P19397 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD53P19397 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.85■□□□□ 0.77
CD53P19397 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD53P19397 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD53P19397 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD53P19397 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.84■□□□□ 0.77
CD53P19397 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD53P19397 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.84■□□□□ 0.77
CD53P19397 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CD53P19397 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD53P19397 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.84■□□□□ 0.77
CD53P19397 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD53P19397 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD53P19397 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.83■□□□□ 0.77
CD53P19397 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.83■□□□□ 0.77
CD53P19397 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.83■□□□□ 0.77
CD53P19397 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD53P19397 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CD53P19397 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
CD53P19397 AC105265.2-201ENST00000467189 838 ntBASIC19.83■□□□□ 0.77
CD53P19397 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CD53P19397 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
CD53P19397 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD53P19397 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.83■□□□□ 0.76
CD53P19397 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.83■□□□□ 0.76
CD53P19397 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD53P19397 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD53P19397 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.83■□□□□ 0.76
CD53P19397 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.83■□□□□ 0.76
CD53P19397 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.82■□□□□ 0.76
CD53P19397 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CD53P19397 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.82■□□□□ 0.76
CD53P19397 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD53P19397 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.82■□□□□ 0.76
CD53P19397 AL136967.2-201ENST00000623968 743 ntBASIC19.82■□□□□ 0.76
CD53P19397 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.82■□□□□ 0.76
CD53P19397 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD53P19397 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD53P19397 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CD53P19397 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.82■□□□□ 0.76
CD53P19397 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD53P19397 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.82■□□□□ 0.76
CD53P19397 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CD53P19397 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.81■□□□□ 0.76
CD53P19397 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD53P19397 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD53P19397 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.81■□□□□ 0.76
CD53P19397 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms