Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC31.91■■■□□ 2.7
CHGAP10645 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC31.91■■■□□ 2.7
CHGAP10645 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CHGAP10645 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CHGAP10645 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CHGAP10645 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
CHGAP10645 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CHGAP10645 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC31.9■■■□□ 2.7
CHGAP10645 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CHGAP10645 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
CHGAP10645 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CHGAP10645 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CHGAP10645 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC31.89■■■□□ 2.7
CHGAP10645 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CHGAP10645 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CHGAP10645 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CHGAP10645 AC026185.1-201ENST00000445748 174 ntBASIC31.89■■■□□ 2.7
CHGAP10645 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CHGAP10645 BID-214ENST00000617586 542 ntTSL 5 BASIC31.89■■■□□ 2.7
CHGAP10645 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC31.89■■■□□ 2.7
CHGAP10645 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CHGAP10645 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC31.88■■■□□ 2.69
CHGAP10645 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC31.88■■■□□ 2.69
CHGAP10645 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC31.88■■■□□ 2.69
CHGAP10645 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CHGAP10645 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
CHGAP10645 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
CHGAP10645 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHGAP10645 GAS2L1P2-201ENST00000436355 1356 ntBASIC31.87■■■□□ 2.69
CHGAP10645 PPP1R14BP3-201ENST00000509033 445 ntBASIC31.87■■■□□ 2.69
CHGAP10645 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC31.87■■■□□ 2.69
CHGAP10645 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
CHGAP10645 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
CHGAP10645 EED-207ENST00000528180 1745 ntTSL 5 BASIC31.86■■■□□ 2.69
CHGAP10645 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC31.86■■■□□ 2.69
CHGAP10645 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
CHGAP10645 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CHGAP10645 SMUG1P1-201ENST00000590640 811 ntBASIC31.86■■■□□ 2.69
CHGAP10645 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
CHGAP10645 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHGAP10645 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
CHGAP10645 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CHGAP10645 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC31.85■■■□□ 2.69
CHGAP10645 MAP2K4P1-201ENST00000438453 1195 ntBASIC31.85■■■□□ 2.69
CHGAP10645 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC31.85■■■□□ 2.69
CHGAP10645 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CHGAP10645 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
CHGAP10645 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CHGAP10645 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CHGAP10645 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC31.84■■■□□ 2.69
CHGAP10645 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CHGAP10645 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC31.84■■■□□ 2.69
CHGAP10645 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CHGAP10645 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CHGAP10645 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHGAP10645 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHGAP10645 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
CHGAP10645 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC31.83■■■□□ 2.69
CHGAP10645 AC104771.1-201ENST00000603335 964 ntBASIC31.83■■■□□ 2.69
CHGAP10645 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHGAP10645 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHGAP10645 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CHGAP10645 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CHGAP10645 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHGAP10645 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHGAP10645 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC31.82■■■□□ 2.68
CHGAP10645 KRT19P1-201ENST00000405746 1186 ntBASIC31.82■■■□□ 2.68
CHGAP10645 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
CHGAP10645 AC006970.2-201ENST00000450065 779 ntBASIC31.82■■■□□ 2.68
CHGAP10645 WWOX-218ENST00000627394 894 ntTSL 5 BASIC31.82■■■□□ 2.68
CHGAP10645 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC31.82■■■□□ 2.68
CHGAP10645 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC31.81■■■□□ 2.68
CHGAP10645 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CHGAP10645 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
CHGAP10645 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC31.81■■■□□ 2.68
CHGAP10645 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
CHGAP10645 CROCCP5-201ENST00000436658 830 ntBASIC31.81■■■□□ 2.68
CHGAP10645 AC010141.3-201ENST00000456659 717 ntBASIC31.81■■■□□ 2.68
CHGAP10645 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC31.81■■■□□ 2.68
CHGAP10645 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC31.81■■■□□ 2.68
CHGAP10645 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC31.81■■■□□ 2.68
CHGAP10645 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CHGAP10645 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CHGAP10645 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHGAP10645 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
CHGAP10645 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHGAP10645 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
CHGAP10645 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHGAP10645 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC31.8■■■□□ 2.68
CHGAP10645 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.8■■■□□ 2.68
CHGAP10645 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC31.8■■■□□ 2.68
CHGAP10645 AC068587.7-201ENST00000641602 218 ntBASIC31.8■■■□□ 2.68
CHGAP10645 AL353803.4-201ENST00000565882 1934 ntBASIC31.8■■■□□ 2.68
CHGAP10645 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
CHGAP10645 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.8■■■□□ 2.68
CHGAP10645 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CHGAP10645 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHGAP10645 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
CHGAP10645 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHGAP10645 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC31.79■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms