Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ERCC1P07992 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC1P07992 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC1P07992 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.39■□□□□ 0.69
ERCC1P07992 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.39■□□□□ 0.69
ERCC1P07992 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC1P07992 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.39■□□□□ 0.69
ERCC1P07992 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERCC1P07992 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC1P07992 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ERCC1P07992 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ERCC1P07992 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC1P07992 MIR638-201ENST00000385237 100 ntBASIC19.38■□□□□ 0.69
ERCC1P07992 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.38■□□□□ 0.69
ERCC1P07992 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC1P07992 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.38■□□□□ 0.69
ERCC1P07992 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.38■□□□□ 0.69
ERCC1P07992 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.38■□□□□ 0.69
ERCC1P07992 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERCC1P07992 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ERCC1P07992 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC1P07992 LINC00565-201ENST00000562710 2331 ntBASIC19.37■□□□□ 0.69
ERCC1P07992 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC1P07992 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ERCC1P07992 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ERCC1P07992 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC1P07992 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC1P07992 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.37■□□□□ 0.69
ERCC1P07992 AC133561.4-201ENST00000566112 224 ntBASIC19.37■□□□□ 0.69
ERCC1P07992 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.37■□□□□ 0.69
ERCC1P07992 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERCC1P07992 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.37■□□□□ 0.69
ERCC1P07992 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ERCC1P07992 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.36■□□□□ 0.69
ERCC1P07992 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC1P07992 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC1P07992 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC1P07992 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ERCC1P07992 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.36■□□□□ 0.69
ERCC1P07992 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC1P07992 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ERCC1P07992 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.36■□□□□ 0.69
ERCC1P07992 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC1P07992 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ERCC1P07992 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.36■□□□□ 0.69
ERCC1P07992 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC1P07992 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERCC1P07992 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC1P07992 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.35■□□□□ 0.69
ERCC1P07992 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC1P07992 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC1P07992 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC1P07992 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.35■□□□□ 0.69
ERCC1P07992 AC110285.6-201ENST00000617652 491 ntBASIC19.35■□□□□ 0.69
ERCC1P07992 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC1P07992 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC1P07992 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC1P07992 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC1P07992 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC1P07992 AC079630.1-202ENST00000618127 1840 ntBASIC19.35■□□□□ 0.69
ERCC1P07992 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC1P07992 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.34■□□□□ 0.69
ERCC1P07992 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.34■□□□□ 0.69
ERCC1P07992 PBX2P1-201ENST00000493219 1291 ntBASIC19.34■□□□□ 0.69
ERCC1P07992 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC1P07992 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.34■□□□□ 0.69
ERCC1P07992 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC1P07992 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.34■□□□□ 0.69
ERCC1P07992 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC1P07992 AC242852.2-201ENST00000615738 1807 ntBASIC19.34■□□□□ 0.69
ERCC1P07992 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ERCC1P07992 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC1P07992 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC1P07992 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC1P07992 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC1P07992 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC1P07992 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC1P07992 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC1P07992 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC1P07992 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC1P07992 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
ERCC1P07992 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ERCC1P07992 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.33■□□□□ 0.68
ERCC1P07992 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
ERCC1P07992 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC1P07992 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC1P07992 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.33■□□□□ 0.68
ERCC1P07992 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC1P07992 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC1P07992 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC1P07992 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ERCC1P07992 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC1P07992 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
ERCC1P07992 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ERCC1P07992 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC1P07992 UNC93B3-201ENST00000308076 687 ntBASIC19.32■□□□□ 0.68
ERCC1P07992 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC1P07992 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.32■□□□□ 0.68
ERCC1P07992 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC1P07992 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms