Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX2-2O95096 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX2-2O95096 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NKX2-2O95096 OR2I1P-207ENST00000453522 948 ntBASIC20.34■□□□□ 0.85
NKX2-2O95096 AC011298.3-201ENST00000615796 283 ntBASIC20.34■□□□□ 0.85
NKX2-2O95096 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX2-2O95096 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NKX2-2O95096 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX2-2O95096 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NKX2-2O95096 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
NKX2-2O95096 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX2-2O95096 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.34■□□□□ 0.85
NKX2-2O95096 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NKX2-2O95096 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.33■□□□□ 0.85
NKX2-2O95096 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NKX2-2O95096 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NKX2-2O95096 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.33■□□□□ 0.85
NKX2-2O95096 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NKX2-2O95096 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NKX2-2O95096 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NKX2-2O95096 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
NKX2-2O95096 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NKX2-2O95096 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NKX2-2O95096 AL031602.1-201ENST00000633169 911 ntBASIC20.33■□□□□ 0.85
NKX2-2O95096 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.33■□□□□ 0.84
NKX2-2O95096 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
NKX2-2O95096 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.33■□□□□ 0.84
NKX2-2O95096 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
NKX2-2O95096 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.32■□□□□ 0.84
NKX2-2O95096 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NKX2-2O95096 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NKX2-2O95096 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NKX2-2O95096 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NKX2-2O95096 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.32■□□□□ 0.84
NKX2-2O95096 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.32■□□□□ 0.84
NKX2-2O95096 CA15P2-201ENST00000611168 834 ntBASIC20.32■□□□□ 0.84
NKX2-2O95096 AC136469.2-201ENST00000623944 1028 ntBASIC20.32■□□□□ 0.84
NKX2-2O95096 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
NKX2-2O95096 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NKX2-2O95096 ECEL1P1-201ENST00000373592 1742 ntBASIC20.32■□□□□ 0.84
NKX2-2O95096 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NKX2-2O95096 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NKX2-2O95096 AC008406.3-201ENST00000620001 1374 ntBASIC20.32■□□□□ 0.84
NKX2-2O95096 AC242852.2-201ENST00000615738 1807 ntBASIC20.32■□□□□ 0.84
NKX2-2O95096 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NKX2-2O95096 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-2O95096 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-2O95096 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
NKX2-2O95096 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.31■□□□□ 0.84
NKX2-2O95096 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-2O95096 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.31■□□□□ 0.84
NKX2-2O95096 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.31■□□□□ 0.84
NKX2-2O95096 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-2O95096 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-2O95096 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-2O95096 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NKX2-2O95096 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.31■□□□□ 0.84
NKX2-2O95096 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-2O95096 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-2O95096 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NKX2-2O95096 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NKX2-2O95096 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-2O95096 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NKX2-2O95096 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NKX2-2O95096 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-2O95096 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-2O95096 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-2O95096 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-2O95096 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-2O95096 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NKX2-2O95096 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.3■□□□□ 0.84
NKX2-2O95096 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-2O95096 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.3■□□□□ 0.84
NKX2-2O95096 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.3■□□□□ 0.84
NKX2-2O95096 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NKX2-2O95096 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.3■□□□□ 0.84
NKX2-2O95096 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-2O95096 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-2O95096 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX2-2O95096 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-2O95096 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-2O95096 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-2O95096 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-2O95096 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-2O95096 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.29■□□□□ 0.84
NKX2-2O95096 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.29■□□□□ 0.84
NKX2-2O95096 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-2O95096 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.29■□□□□ 0.84
NKX2-2O95096 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX2-2O95096 AC080038.3-201ENST00000623346 1952 ntBASIC20.28■□□□□ 0.84
NKX2-2O95096 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-2O95096 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-2O95096 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-2O95096 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-2O95096 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-2O95096 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.28■□□□□ 0.84
NKX2-2O95096 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-2O95096 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NKX2-2O95096 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.28■□□□□ 0.84
NKX2-2O95096 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms