Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GPC4O75487 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GPC4O75487 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GPC4O75487 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
GPC4O75487 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.92■■□□□ 1.1
GPC4O75487 DUX4L4-201ENST00000566884 1269 ntBASIC21.92■■□□□ 1.1
GPC4O75487 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
GPC4O75487 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.92■■□□□ 1.1
GPC4O75487 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GPC4O75487 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.92■■□□□ 1.1
GPC4O75487 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.92■■□□□ 1.1
GPC4O75487 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
GPC4O75487 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GPC4O75487 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GPC4O75487 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.91■■□□□ 1.1
GPC4O75487 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GPC4O75487 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GPC4O75487 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
GPC4O75487 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GPC4O75487 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.9■■□□□ 1.1
GPC4O75487 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.9■■□□□ 1.1
GPC4O75487 LINC00565-201ENST00000562710 2331 ntBASIC21.9■■□□□ 1.1
GPC4O75487 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GPC4O75487 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GPC4O75487 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
GPC4O75487 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GPC4O75487 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GPC4O75487 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.9■■□□□ 1.1
GPC4O75487 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.9■■□□□ 1.1
GPC4O75487 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
GPC4O75487 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GPC4O75487 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.9■■□□□ 1.1
GPC4O75487 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.9■■□□□ 1.1
GPC4O75487 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
GPC4O75487 GUSBP5-202ENST00000510805 1989 ntBASIC21.9■■□□□ 1.1
GPC4O75487 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GPC4O75487 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.9■■□□□ 1.1
GPC4O75487 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
GPC4O75487 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.89■■□□□ 1.09
GPC4O75487 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GPC4O75487 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GPC4O75487 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GPC4O75487 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.89■■□□□ 1.09
GPC4O75487 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.89■■□□□ 1.09
GPC4O75487 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GPC4O75487 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.89■■□□□ 1.09
GPC4O75487 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GPC4O75487 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GPC4O75487 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GPC4O75487 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GPC4O75487 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GPC4O75487 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GPC4O75487 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
GPC4O75487 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
GPC4O75487 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GPC4O75487 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.88■■□□□ 1.09
GPC4O75487 AC241377.3-202ENST00000626088 1088 ntBASIC21.88■■□□□ 1.09
GPC4O75487 AC241585.3-202ENST00000628937 1088 ntBASIC21.88■■□□□ 1.09
GPC4O75487 AC245100.8-202ENST00000629247 1058 ntBASIC21.88■■□□□ 1.09
GPC4O75487 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
GPC4O75487 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
GPC4O75487 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
GPC4O75487 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GPC4O75487 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.87■■□□□ 1.09
GPC4O75487 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GPC4O75487 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GPC4O75487 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
GPC4O75487 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GPC4O75487 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
GPC4O75487 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
GPC4O75487 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GPC4O75487 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
GPC4O75487 SRD5A1P1-201ENST00000442297 786 ntBASIC21.87■■□□□ 1.09
GPC4O75487 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GPC4O75487 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.87■■□□□ 1.09
GPC4O75487 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
GPC4O75487 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GPC4O75487 LINC00526-201ENST00000581067 1875 ntBASIC21.87■■□□□ 1.09
GPC4O75487 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GPC4O75487 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
GPC4O75487 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
GPC4O75487 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GPC4O75487 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GPC4O75487 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GPC4O75487 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GPC4O75487 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.86■■□□□ 1.09
GPC4O75487 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GPC4O75487 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
GPC4O75487 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GPC4O75487 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
GPC4O75487 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GPC4O75487 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
GPC4O75487 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.85■■□□□ 1.09
GPC4O75487 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GPC4O75487 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
GPC4O75487 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.85■■□□□ 1.09
GPC4O75487 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.85■■□□□ 1.09
GPC4O75487 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.85■■□□□ 1.09
GPC4O75487 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GPC4O75487 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms