Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GMDSO60547 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GMDSO60547 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.36■□□□□ 0.69
GMDSO60547 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GMDSO60547 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GMDSO60547 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GMDSO60547 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GMDSO60547 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.35■□□□□ 0.69
GMDSO60547 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GMDSO60547 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GMDSO60547 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GMDSO60547 TSPY9P-201ENST00000440215 945 ntBASIC19.35■□□□□ 0.69
GMDSO60547 TSPY11P-201ENST00000442607 1045 ntBASIC19.35■□□□□ 0.69
GMDSO60547 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.35■□□□□ 0.69
GMDSO60547 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.35■□□□□ 0.69
GMDSO60547 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GMDSO60547 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GMDSO60547 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
GMDSO60547 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GMDSO60547 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GMDSO60547 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GMDSO60547 AC242852.2-201ENST00000615738 1807 ntBASIC19.35■□□□□ 0.69
GMDSO60547 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GMDSO60547 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GMDSO60547 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GMDSO60547 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GMDSO60547 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GMDSO60547 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GMDSO60547 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GMDSO60547 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.34■□□□□ 0.69
GMDSO60547 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GMDSO60547 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
GMDSO60547 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GMDSO60547 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GMDSO60547 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GMDSO60547 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
GMDSO60547 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.33■□□□□ 0.69
GMDSO60547 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GMDSO60547 AC079630.1-202ENST00000618127 1840 ntBASIC19.33■□□□□ 0.69
GMDSO60547 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.33■□□□□ 0.68
GMDSO60547 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.33■□□□□ 0.68
GMDSO60547 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GMDSO60547 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.33■□□□□ 0.68
GMDSO60547 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
GMDSO60547 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GMDSO60547 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.33■□□□□ 0.68
GMDSO60547 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
GMDSO60547 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.32■□□□□ 0.68
GMDSO60547 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
GMDSO60547 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
GMDSO60547 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GMDSO60547 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GMDSO60547 GUSBP5-201ENST00000418136 578 ntBASIC19.32■□□□□ 0.68
GMDSO60547 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.32■□□□□ 0.68
GMDSO60547 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GMDSO60547 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GMDSO60547 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GMDSO60547 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GMDSO60547 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GMDSO60547 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.31■□□□□ 0.68
GMDSO60547 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GMDSO60547 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GMDSO60547 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GMDSO60547 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GMDSO60547 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
GMDSO60547 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
GMDSO60547 UNC93B8-201ENST00000511903 705 ntBASIC19.31■□□□□ 0.68
GMDSO60547 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.31■□□□□ 0.68
GMDSO60547 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
GMDSO60547 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.31■□□□□ 0.68
GMDSO60547 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GMDSO60547 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
GMDSO60547 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GMDSO60547 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GMDSO60547 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.3■□□□□ 0.68
GMDSO60547 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.3■□□□□ 0.68
GMDSO60547 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.3■□□□□ 0.68
GMDSO60547 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.3■□□□□ 0.68
GMDSO60547 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GMDSO60547 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GMDSO60547 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.3■□□□□ 0.68
GMDSO60547 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GMDSO60547 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.3■□□□□ 0.68
GMDSO60547 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.3■□□□□ 0.68
GMDSO60547 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
GMDSO60547 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.3■□□□□ 0.68
GMDSO60547 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GMDSO60547 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
GMDSO60547 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GMDSO60547 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
GMDSO60547 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GMDSO60547 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.29■□□□□ 0.68
GMDSO60547 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GMDSO60547 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GMDSO60547 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
GMDSO60547 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GMDSO60547 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.29■□□□□ 0.68
GMDSO60547 KRT16P3-201ENST00000439127 1283 ntBASIC19.29■□□□□ 0.68
GMDSO60547 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
GMDSO60547 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms