Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.06■□□□□ 0.96
NDUFS4O43181 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.06■□□□□ 0.96
NDUFS4O43181 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFS4O43181 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.06■□□□□ 0.96
NDUFS4O43181 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFS4O43181 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.06■□□□□ 0.96
NDUFS4O43181 AL139246.5-201ENST00000606645 996 ntBASIC21.06■□□□□ 0.96
NDUFS4O43181 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
NDUFS4O43181 AC106739.1-201ENST00000617035 715 ntBASIC21.06■□□□□ 0.96
NDUFS4O43181 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFS4O43181 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
NDUFS4O43181 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFS4O43181 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFS4O43181 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NDUFS4O43181 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NDUFS4O43181 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFS4O43181 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFS4O43181 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFS4O43181 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.05■□□□□ 0.96
NDUFS4O43181 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFS4O43181 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFS4O43181 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NDUFS4O43181 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFS4O43181 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.04■□□□□ 0.96
NDUFS4O43181 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
NDUFS4O43181 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFS4O43181 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFS4O43181 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFS4O43181 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFS4O43181 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFS4O43181 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.03■□□□□ 0.96
NDUFS4O43181 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFS4O43181 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
NDUFS4O43181 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFS4O43181 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.03■□□□□ 0.96
NDUFS4O43181 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.03■□□□□ 0.96
NDUFS4O43181 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFS4O43181 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFS4O43181 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFS4O43181 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFS4O43181 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFS4O43181 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
NDUFS4O43181 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFS4O43181 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NDUFS4O43181 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFS4O43181 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFS4O43181 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NDUFS4O43181 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NDUFS4O43181 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFS4O43181 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.02■□□□□ 0.96
NDUFS4O43181 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NDUFS4O43181 OR2I1P-207ENST00000453522 948 ntBASIC21.02■□□□□ 0.96
NDUFS4O43181 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NDUFS4O43181 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.02■□□□□ 0.96
NDUFS4O43181 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.02■□□□□ 0.96
NDUFS4O43181 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.02■□□□□ 0.96
NDUFS4O43181 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFS4O43181 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
NDUFS4O43181 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
NDUFS4O43181 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NDUFS4O43181 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NDUFS4O43181 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NDUFS4O43181 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFS4O43181 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NDUFS4O43181 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFS4O43181 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFS4O43181 AC233723.2-201ENST00000623798 2106 ntBASIC21.01■□□□□ 0.95
NDUFS4O43181 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFS4O43181 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFS4O43181 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFS4O43181 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.01■□□□□ 0.95
NDUFS4O43181 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.01■□□□□ 0.95
NDUFS4O43181 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFS4O43181 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFS4O43181 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS4O43181 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS4O43181 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS4O43181 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS4O43181 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS4O43181 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NDUFS4O43181 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS4O43181 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21■□□□□ 0.95
NDUFS4O43181 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NDUFS4O43181 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS4O43181 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21■□□□□ 0.95
NDUFS4O43181 LINC01960-201ENST00000563759 1884 ntBASIC21■□□□□ 0.95
NDUFS4O43181 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NDUFS4O43181 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NDUFS4O43181 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21■□□□□ 0.95
NDUFS4O43181 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.99■□□□□ 0.95
NDUFS4O43181 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NDUFS4O43181 ESRRAP2-201ENST00000418437 1549 ntBASIC20.99■□□□□ 0.95
NDUFS4O43181 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFS4O43181 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NDUFS4O43181 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NDUFS4O43181 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NDUFS4O43181 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NDUFS4O43181 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFS4O43181 SLC47A1P1-202ENST00000449666 945 ntBASIC20.99■□□□□ 0.95
NDUFS4O43181 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms