Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LST1O00453 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC14.31□□□□□ -0.12
LST1O00453 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LST1O00453 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
LST1O00453 LINC01006-201ENST00000333319 2292 ntBASIC14.3□□□□□ -0.12
LST1O00453 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC14.3□□□□□ -0.12
LST1O00453 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LST1O00453 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LST1O00453 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LST1O00453 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LST1O00453 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LST1O00453 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LST1O00453 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC14.3□□□□□ -0.12
LST1O00453 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LST1O00453 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LST1O00453 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LST1O00453 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LST1O00453 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LST1O00453 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LST1O00453 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.29□□□□□ -0.12
LST1O00453 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LST1O00453 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.29□□□□□ -0.12
LST1O00453 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.29□□□□□ -0.12
LST1O00453 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LST1O00453 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LST1O00453 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LST1O00453 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.29□□□□□ -0.12
LST1O00453 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LST1O00453 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LST1O00453 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC14.29□□□□□ -0.12
LST1O00453 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LST1O00453 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LST1O00453 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC14.29□□□□□ -0.12
LST1O00453 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LST1O00453 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.29□□□□□ -0.12
LST1O00453 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.28□□□□□ -0.12
LST1O00453 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LST1O00453 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LST1O00453 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LST1O00453 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LST1O00453 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LST1O00453 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LST1O00453 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LST1O00453 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LST1O00453 AL020996.1-203ENST00000536896 2307 ntBASIC14.28□□□□□ -0.12
LST1O00453 CIB2-204ENST00000557846 934 ntTSL 3 BASIC14.28□□□□□ -0.12
LST1O00453 MIR3665-201ENST00000578708 105 ntBASIC14.28□□□□□ -0.12
LST1O00453 CD37-213ENST00000598095 1598 ntTSL 2 BASIC14.28□□□□□ -0.12
LST1O00453 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.28□□□□□ -0.12
LST1O00453 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.27□□□□□ -0.12
LST1O00453 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.27□□□□□ -0.12
LST1O00453 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LST1O00453 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.27□□□□□ -0.12
LST1O00453 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LST1O00453 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC14.27□□□□□ -0.12
LST1O00453 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
LST1O00453 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.27□□□□□ -0.12
LST1O00453 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LST1O00453 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LST1O00453 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LST1O00453 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LST1O00453 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LST1O00453 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LST1O00453 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LST1O00453 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LST1O00453 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.27□□□□□ -0.13
LST1O00453 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.27□□□□□ -0.13
LST1O00453 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LST1O00453 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
LST1O00453 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LST1O00453 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LST1O00453 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LST1O00453 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LST1O00453 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LST1O00453 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LST1O00453 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LST1O00453 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.26□□□□□ -0.13
LST1O00453 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LST1O00453 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LST1O00453 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LST1O00453 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
LST1O00453 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LST1O00453 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
LST1O00453 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LST1O00453 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LST1O00453 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.26□□□□□ -0.13
LST1O00453 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LST1O00453 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.26□□□□□ -0.13
LST1O00453 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
LST1O00453 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LST1O00453 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LST1O00453 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LST1O00453 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LST1O00453 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC14.25□□□□□ -0.13
LST1O00453 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LST1O00453 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.25□□□□□ -0.13
LST1O00453 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LST1O00453 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LST1O00453 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LST1O00453 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms