Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RTCAO00442 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTCAO00442 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTCAO00442 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.97■□□□□ 0.95
RTCAO00442 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTCAO00442 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTCAO00442 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCAO00442 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCAO00442 AC087742.1-201ENST00000575880 1738 ntBASIC20.96■□□□□ 0.95
RTCAO00442 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTCAO00442 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTCAO00442 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCAO00442 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RTCAO00442 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.96■□□□□ 0.95
RTCAO00442 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.96■□□□□ 0.95
RTCAO00442 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RTCAO00442 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.96■□□□□ 0.95
RTCAO00442 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.96■□□□□ 0.95
RTCAO00442 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCAO00442 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.96■□□□□ 0.95
RTCAO00442 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCAO00442 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCAO00442 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTCAO00442 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTCAO00442 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTCAO00442 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTCAO00442 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTCAO00442 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.95■□□□□ 0.94
RTCAO00442 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.95■□□□□ 0.94
RTCAO00442 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTCAO00442 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.95■□□□□ 0.94
RTCAO00442 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RTCAO00442 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.94■□□□□ 0.94
RTCAO00442 LINC01960-201ENST00000563759 1884 ntBASIC20.94■□□□□ 0.94
RTCAO00442 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTCAO00442 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTCAO00442 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTCAO00442 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTCAO00442 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
RTCAO00442 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTCAO00442 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.94■□□□□ 0.94
RTCAO00442 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.94■□□□□ 0.94
RTCAO00442 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTCAO00442 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
RTCAO00442 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCAO00442 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTCAO00442 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.93■□□□□ 0.94
RTCAO00442 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
RTCAO00442 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.93■□□□□ 0.94
RTCAO00442 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTCAO00442 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RTCAO00442 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCAO00442 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCAO00442 GUSBP5-202ENST00000510805 1989 ntBASIC20.93■□□□□ 0.94
RTCAO00442 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCAO00442 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.93■□□□□ 0.94
RTCAO00442 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCAO00442 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.93■□□□□ 0.94
RTCAO00442 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.93■□□□□ 0.94
RTCAO00442 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTCAO00442 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCAO00442 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTCAO00442 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RTCAO00442 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTCAO00442 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.92■□□□□ 0.94
RTCAO00442 DUX4L19-201ENST00000557448 1267 ntBASIC20.92■□□□□ 0.94
RTCAO00442 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.92■□□□□ 0.94
RTCAO00442 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RTCAO00442 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTCAO00442 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RTCAO00442 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTCAO00442 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTCAO00442 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
RTCAO00442 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTCAO00442 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTCAO00442 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTCAO00442 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTCAO00442 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTCAO00442 UNC93B3-201ENST00000308076 687 ntBASIC20.91■□□□□ 0.94
RTCAO00442 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTCAO00442 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTCAO00442 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.91■□□□□ 0.94
RTCAO00442 ESRRAP2-201ENST00000418437 1549 ntBASIC20.91■□□□□ 0.94
RTCAO00442 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RTCAO00442 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RTCAO00442 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTCAO00442 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.91■□□□□ 0.94
RTCAO00442 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RTCAO00442 AL117328.2-201ENST00000624617 1940 ntBASIC20.91■□□□□ 0.94
RTCAO00442 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTCAO00442 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTCAO00442 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTCAO00442 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTCAO00442 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTCAO00442 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTCAO00442 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.9■□□□□ 0.94
RTCAO00442 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.9■□□□□ 0.94
RTCAO00442 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTCAO00442 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTCAO00442 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms