Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01548A6NM66 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
LINC01548A6NM66 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LINC01548A6NM66 AC091305.1-201ENST00000479476 895 ntBASIC17.38■□□□□ 0.37
LINC01548A6NM66 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01548A6NM66 AC126544.1-201ENST00000580842 1059 ntBASIC17.38■□□□□ 0.37
LINC01548A6NM66 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LINC01548A6NM66 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01548A6NM66 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01548A6NM66 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
LINC01548A6NM66 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01548A6NM66 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LINC01548A6NM66 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.37■□□□□ 0.37
LINC01548A6NM66 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
LINC01548A6NM66 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01548A6NM66 ZNRF2P3-201ENST00000424200 374 ntBASIC17.37■□□□□ 0.37
LINC01548A6NM66 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.37■□□□□ 0.37
LINC01548A6NM66 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.37■□□□□ 0.37
LINC01548A6NM66 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.37■□□□□ 0.37
LINC01548A6NM66 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.37■□□□□ 0.37
LINC01548A6NM66 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC01548A6NM66 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01548A6NM66 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC01548A6NM66 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01548A6NM66 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01548A6NM66 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LINC01548A6NM66 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01548A6NM66 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01548A6NM66 AC105265.2-201ENST00000467189 838 ntBASIC17.36■□□□□ 0.37
LINC01548A6NM66 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01548A6NM66 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LINC01548A6NM66 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01548A6NM66 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01548A6NM66 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01548A6NM66 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01548A6NM66 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01548A6NM66 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01548A6NM66 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01548A6NM66 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01548A6NM66 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LINC01548A6NM66 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC01548A6NM66 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.35■□□□□ 0.37
LINC01548A6NM66 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01548A6NM66 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.35■□□□□ 0.37
LINC01548A6NM66 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LINC01548A6NM66 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01548A6NM66 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LINC01548A6NM66 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC01548A6NM66 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01548A6NM66 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01548A6NM66 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LINC01548A6NM66 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01548A6NM66 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC01548A6NM66 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC01548A6NM66 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LINC01548A6NM66 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC01548A6NM66 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC01548A6NM66 C1orf229-201ENST00000623686 2258 ntBASIC17.33■□□□□ 0.37
LINC01548A6NM66 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.33■□□□□ 0.37
LINC01548A6NM66 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
LINC01548A6NM66 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC01548A6NM66 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC01548A6NM66 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.33■□□□□ 0.37
LINC01548A6NM66 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01548A6NM66 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01548A6NM66 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LINC01548A6NM66 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.33■□□□□ 0.36
LINC01548A6NM66 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01548A6NM66 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.33■□□□□ 0.36
LINC01548A6NM66 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01548A6NM66 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.33■□□□□ 0.36
LINC01548A6NM66 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.33■□□□□ 0.36
LINC01548A6NM66 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01548A6NM66 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01548A6NM66 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01548A6NM66 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01548A6NM66 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01548A6NM66 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.33■□□□□ 0.36
LINC01548A6NM66 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
LINC01548A6NM66 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01548A6NM66 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01548A6NM66 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01548A6NM66 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LINC01548A6NM66 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01548A6NM66 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC01548A6NM66 TSPY26P-201ENST00000476365 1326 ntBASIC17.32■□□□□ 0.36
LINC01548A6NM66 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01548A6NM66 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.32■□□□□ 0.36
LINC01548A6NM66 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01548A6NM66 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC01548A6NM66 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01548A6NM66 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC01548A6NM66 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
LINC01548A6NM66 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01548A6NM66 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LINC01548A6NM66 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC01548A6NM66 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01548A6NM66 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
LINC01548A6NM66 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC01548A6NM66 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms