Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV3D-7A0A0C4DH55 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
IGKV3D-7A0A0C4DH55 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
IGKV3D-7A0A0C4DH55 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV3D-7A0A0C4DH55 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV3D-7A0A0C4DH55 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV3D-7A0A0C4DH55 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
IGKV3D-7A0A0C4DH55 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC13.77□□□□□ -0.21
IGKV3D-7A0A0C4DH55 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
IGKV3D-7A0A0C4DH55 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV3D-7A0A0C4DH55 RPS2-209ENST00000529806 993 ntTSL 3 BASIC13.77□□□□□ -0.21
IGKV3D-7A0A0C4DH55 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV3D-7A0A0C4DH55 AC092053.2-201ENST00000640557 1818 ntBASIC13.77□□□□□ -0.21
IGKV3D-7A0A0C4DH55 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
IGKV3D-7A0A0C4DH55 AL020996.1-203ENST00000536896 2307 ntBASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 AC092068.2-201ENST00000590491 1708 ntBASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
IGKV3D-7A0A0C4DH55 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 AC087289.5-201ENST00000586076 3175 ntBASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC13.75□□□□□ -0.21
IGKV3D-7A0A0C4DH55 AIRN-201ENST00000601203 4374 ntBASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
IGKV3D-7A0A0C4DH55 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 LSR-205ENST00000427250 1606 ntTSL 2 BASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 CAHM-201ENST00000604200 896 ntBASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV3D-7A0A0C4DH55 ESRRAP2-201ENST00000418437 1549 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms