Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 pRNA.11-201ENST00000618423 90 ntBASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 pRNA.13-201ENST00000619112 90 ntBASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.48■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.48■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.48■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 AC242852.2-201ENST00000615738 1807 ntBASIC19.48■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 AC139530.1-201ENST00000575312 1977 ntBASIC19.48■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 AC131281.2-201ENST00000520478 145 ntBASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 SRD5A1P1-201ENST00000442297 786 ntBASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 AC133637.1-201ENST00000624115 1537 ntBASIC19.46■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 MIR3181-201ENST00000578512 73 ntBASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.43■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.43■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 LINC00565-201ENST00000562710 2331 ntBASIC19.42■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.42■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.42■□□□□ 0.7
IGKV1D-43A0A0B4J1Z2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms