Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 AC092028.1-203ENST00000608262 953 ntBASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 AC004448.1-201ENST00000458332 883 ntBASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 MTDHP2-201ENST00000601468 714 ntBASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-3A0A0A6YYJ7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.46■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 AC242852.2-201ENST00000615738 1807 ntBASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.44■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms