Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZWINT-203ENST00000373944 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LMO3Q8TAP4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LMO3Q8TAP4 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.89□□□□□ -0.19
LMO3Q8TAP4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LMO3Q8TAP4 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 CICP18-201ENST00000406017 2812 ntBASIC13.88□□□□□ -0.19
LMO3Q8TAP4 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 SEC14L1-203ENST00000431431 2504 ntTSL 2 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 RBMXP1-201ENST00000408004 1191 ntBASIC13.88□□□□□ -0.19
LMO3Q8TAP4 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 VENTXP4-201ENST00000449029 958 ntBASIC13.88□□□□□ -0.19
LMO3Q8TAP4 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 MIR4750-201ENST00000584564 56 ntBASIC13.88□□□□□ -0.19
LMO3Q8TAP4 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 AC010601.2-201ENST00000623060 774 ntBASIC13.88□□□□□ -0.19
LMO3Q8TAP4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 PAAF1-214ENST00000544552 1612 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 FLJ30679-201ENST00000624773 1980 ntBASIC13.88□□□□□ -0.19
LMO3Q8TAP4 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 AC126323.1-203ENST00000562306 2579 ntBASIC13.88□□□□□ -0.19
LMO3Q8TAP4 LINC00355-201ENST00000456627 1878 ntTSL 2 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 TPRX1-203ENST00000543508 1526 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 FAM95B1-211ENST00000592053 1541 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 AL669942.1-203ENST00000610972 1541 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 SNAP91-212ENST00000520302 4136 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 PMEL-201ENST00000449260 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 RIPK3-201ENST00000216274 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LMO3Q8TAP4 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 ALDH7A1-224ENST00000636743 2332 ntTSL 5 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 CHI3L2-201ENST00000369744 1489 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 KRT8P15-201ENST00000425226 1451 ntBASIC13.87□□□□□ -0.19
LMO3Q8TAP4 FAM226B-201ENST00000602508 1490 ntBASIC13.87□□□□□ -0.19
LMO3Q8TAP4 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 CICP19-201ENST00000632944 2357 ntBASIC13.87□□□□□ -0.19
LMO3Q8TAP4 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 AC140481.3-201ENST00000450440 1762 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 TRIM39-204ENST00000396548 3198 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 VIPAS39-206ENST00000553888 2934 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 TULP3P1-202ENST00000453253 1291 ntBASIC13.87□□□□□ -0.19
LMO3Q8TAP4 AC026470.1-201ENST00000478038 846 ntBASIC13.87□□□□□ -0.19
LMO3Q8TAP4 GNGT2-204ENST00000511277 918 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 AC068831.5-201ENST00000557387 328 ntBASIC13.87□□□□□ -0.19
LMO3Q8TAP4 AC242988.1-201ENST00000611044 714 ntTSL 3 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 AC022400.8-201ENST00000623453 3599 ntBASIC13.87□□□□□ -0.19
LMO3Q8TAP4 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 IFT74-201ENST00000380062 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LMO3Q8TAP4 PCBP2-201ENST00000359282 1730 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms